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5HLK

Crystal structure of the ternary EcoRV-DNA-Lu complex with cleaved DNA substrate.

Replaces:  4ORJ
Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004519molecular_functionendonuclease activity
A0009036molecular_functiontype II site-specific deoxyribonuclease activity
A0009307biological_processDNA restriction-modification system
A0046872molecular_functionmetal ion binding
B0003677molecular_functionDNA binding
B0004519molecular_functionendonuclease activity
B0009036molecular_functiontype II site-specific deoxyribonuclease activity
B0009307biological_processDNA restriction-modification system
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue EDO A 301
ChainResidue
AASN100
ALYS167
AHIS195
ATYR196
ALYS197
AHOH402

site_idAC2
Number of Residues3
Detailsbinding site for residue EDO A 302
ChainResidue
AASP210
AGLU211
AHOH468

site_idAC3
Number of Residues6
Detailsbinding site for residue EDO A 303
ChainResidue
AASN15
ATYR18
AASP19
AVAL20
APHE47
ANA305

site_idAC4
Number of Residues8
Detailsbinding site for residue EDO A 304
ChainResidue
AGLU45
AASP74
AASP90
AILE91
ALYS92
ALU307
AHOH420
EDA7

site_idAC5
Number of Residues5
Detailsbinding site for residue NA A 305
ChainResidue
AASN15
ATYR18
AASP19
AEDO303
AHOH494

site_idAC6
Number of Residues5
Detailsbinding site for residue NA A 306
ChainResidue
ATHR186
ATHR187
AHOH444
BHOH497
CDT6

site_idAC7
Number of Residues6
Detailsbinding site for residue LU A 307
ChainResidue
AGLU45
AASP74
AEDO304
AHOH413
AHOH420
EDA7

site_idAC8
Number of Residues6
Detailsbinding site for residue LU A 308
ChainResidue
ALYS38
BGLU45
BASP74
BLU306
BLU307
FDA7

site_idAC9
Number of Residues6
Detailsbinding site for residue EDO B 301
ChainResidue
BASN15
BTYR18
BASP19
BVAL20
BPHE47
BNA304

site_idAD1
Number of Residues5
Detailsbinding site for residue EDO B 302
ChainResidue
BGLY184
BTHR187
BARG221
BHOH424
BHOH443

site_idAD2
Number of Residues7
Detailsbinding site for residue EDO B 303
ChainResidue
AARG242
ALYS245
BASP207
BSER208
BASP210
BGLU211
BHOH448

site_idAD3
Number of Residues5
Detailsbinding site for residue NA B 304
ChainResidue
BASN15
BTYR18
BASP19
BEDO301
BHOH481

site_idAD4
Number of Residues5
Detailsbinding site for residue NA B 305
ChainResidue
BTHR186
BTHR187
BHOH476
DDT6
DHOH107

site_idAD5
Number of Residues6
Detailsbinding site for residue LU B 306
ChainResidue
ALU308
AHOH449
BGLU45
BASP74
BHOH413
FDA7

site_idAD6
Number of Residues5
Detailsbinding site for residue LU B 307
ChainResidue
ALU308
BASP74
BASP90
BHOH406
FDA7

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE:
ChainResidueDetails
AASP74
AASP90
ALYS92
BASP74
BASP90
BLYS92

site_idSWS_FT_FI2
Number of Residues6
DetailsBINDING:
ChainResidueDetails
AGLU45
AASP74
AASP90
BGLU45
BASP74
BASP90

223790

PDB entries from 2024-08-14

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