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5HGW

Crystal structure of a peptide deformylase from Burkholderia ambifaria

Functional Information from GO Data
ChainGOidnamespacecontents
A0006412biological_processtranslation
A0016787molecular_functionhydrolase activity
A0018206biological_processpeptidyl-methionine modification
A0042586molecular_functionpeptide deformylase activity
A0046872molecular_functionmetal ion binding
B0006412biological_processtranslation
B0016787molecular_functionhydrolase activity
B0018206biological_processpeptidyl-methionine modification
B0042586molecular_functionpeptide deformylase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue FE A 200
ChainResidue
ACYS99
AHIS141
AHIS145
ASO4201
AHOH311

site_idAC2
Number of Residues11
Detailsbinding site for residue SO4 A 201
ChainResidue
AGLY98
ACYS99
ALEU100
AGLU142
AFE200
AEDO207
AHOH311
AGLY44
AALA45
AARG68
ATYR69

site_idAC3
Number of Residues10
Detailsbinding site for residue SO4 A 202
ChainResidue
AARG68
APRO103
AGLY104
AARG106
ATHR164
AHOH357
AHOH415
AHOH447
AHOH462
AHOH467

site_idAC4
Number of Residues4
Detailsbinding site for residue SO4 A 203
ChainResidue
APHE63
AGLY64
ASER65
AHOH301

site_idAC5
Number of Residues2
Detailsbinding site for residue SO4 A 204
ChainResidue
AARG129
AHOH353

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO A 205
ChainResidue
AASP71
AHOH369
AHOH386
AHOH439
AHOH451
AHOH461

site_idAC7
Number of Residues8
Detailsbinding site for residue EDO A 206
ChainResidue
AGLU94
ATRP96
AHOH310
AHOH391
AHOH472
BGLU15
BVAL16
BLYS18

site_idAC8
Number of Residues6
Detailsbinding site for residue EDO A 207
ChainResidue
ATYR69
AGLU97
AGLY98
AVAL138
AHIS141
ASO4201

site_idAC9
Number of Residues5
Detailsbinding site for residue FE B 200
ChainResidue
BCYS99
BHIS141
BHIS145
BSO4201
BHOH311

site_idAD1
Number of Residues11
Detailsbinding site for residue SO4 B 201
ChainResidue
BGLY44
BALA45
BARG68
BTYR69
BGLY98
BCYS99
BLEU100
BGLU142
BFE200
BEDO205
BHOH311

site_idAD2
Number of Residues8
Detailsbinding site for residue SO4 B 202
ChainResidue
BARG68
BGLY104
BARG106
BTHR164
BHOH394
BHOH398
BHOH411
BHOH458

site_idAD3
Number of Residues4
Detailsbinding site for residue SO4 B 203
ChainResidue
BPHE63
BGLY64
BSER65
BHOH312

site_idAD4
Number of Residues2
Detailsbinding site for residue SO4 B 204
ChainResidue
BARG129
BHOH442

site_idAD5
Number of Residues5
Detailsbinding site for residue EDO B 205
ChainResidue
BTYR69
BGLU97
BGLY98
BHIS141
BSO4201

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PDB entries from 2024-10-09

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