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5HDV

BACE-1 incomplex with (7aR)-7a-(5-cyanothiophen-2-yl)-6-(5-fluoro-4-methoxy-6-methylpyrimidin-2-yl)-3-methyl-4-oxooctahydro-2H-pyrrolo[3,4-d]pyrimidin-2-iminium

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
A0016020cellular_componentmembrane
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue 60V A 501
ChainResidue
AGLN73
ATHR292
AHOH766
AHOH816
AHOH883
ALEU91
AASP93
ASER96
AASN98
ATRP137
AARG189
AASP289
AGLY291

site_idAC2
Number of Residues9
Detailsbinding site for residue TLA B 501
ChainResidue
BARG68
BASN89
BHIS110
BARG111
BASN175
BHOH601
BHOH715
BHOH771
BHOH877

site_idAC3
Number of Residues17
Detailsbinding site for residue 60V B 502
ChainResidue
BGLN73
BLEU91
BASP93
BSER96
BASN98
BVAL130
BTYR132
BTRP137
BILE171
BILE179
BASP289
BGLY291
BTHR292
BHOH804
BHOH833
BHOH834
BHOH889

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. ILVDTGSSNFAV
ChainResidueDetails
AILE90-VAL101

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsActive site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU10094","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues14
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"PubMed","id":"17425515","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"19011241","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues8
DetailsGlycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

246031

PDB entries from 2025-12-10

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