5HC8
Crystal structure of lavandulyl diphosphate synthase from Lavandula x intermedia in complex with dimethylallyl diphosphate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0002094 | molecular_function | polyprenyltransferase activity |
A | 0009409 | biological_process | response to cold |
A | 0009570 | cellular_component | chloroplast stroma |
A | 0009668 | biological_process | plastid membrane organization |
A | 0016094 | biological_process | polyprenol biosynthetic process |
A | 0016740 | molecular_function | transferase activity |
A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
A | 0045547 | molecular_function | dehydrodolichyl diphosphate synthase activity |
A | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue MG A 401 |
Chain | Residue |
A | ASP76 |
A | PIS402 |
A | ISY405 |
A | HOH513 |
A | HOH514 |
site_id | AC2 |
Number of Residues | 15 |
Details | binding site for residue PIS A 402 |
Chain | Residue |
A | LYS80 |
A | HIS93 |
A | ARG127 |
A | MG401 |
A | 61G403 |
A | ISY405 |
A | HOH501 |
A | HOH509 |
A | HOH513 |
A | HOH514 |
A | HOH517 |
A | ASP76 |
A | GLY77 |
A | HIS78 |
A | ARG79 |
site_id | AC3 |
Number of Residues | 7 |
Details | binding site for residue 61G A 403 |
Chain | Residue |
A | HIS78 |
A | ALA119 |
A | ASN124 |
A | ARG127 |
A | TYR139 |
A | PIS402 |
A | HOH562 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue SO4 A 404 |
Chain | Residue |
A | HIS190 |
A | THR238 |
A | LYS239 |
A | HOH503 |
site_id | AC5 |
Number of Residues | 20 |
Details | binding site for residue ISY A 405 |
Chain | Residue |
A | ILE74 |
A | ILE75 |
A | ASP76 |
A | TRP118 |
A | SER121 |
A | ASN124 |
A | ARG127 |
A | ARG248 |
A | ARG254 |
A | SER256 |
A | GLY296 |
A | PHE297 |
A | GLY298 |
A | MG401 |
A | PIS402 |
A | HOH513 |
A | HOH514 |
A | HOH525 |
A | HOH531 |
A | HOH546 |