5HC8
Crystal structure of lavandulyl diphosphate synthase from Lavandula x intermedia in complex with dimethylallyl diphosphate
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0004659 | molecular_function | prenyltransferase activity |
| A | 0009409 | biological_process | response to cold |
| A | 0009507 | cellular_component | chloroplast |
| A | 0009570 | cellular_component | chloroplast stroma |
| A | 0009668 | biological_process | plastid membrane organization |
| A | 0016094 | biological_process | polyprenol biosynthetic process |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016765 | molecular_function | transferase activity, transferring alkyl or aryl (other than methyl) groups |
| A | 0045547 | molecular_function | ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity |
| A | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue MG A 401 |
| Chain | Residue |
| A | ASP76 |
| A | PIS402 |
| A | ISY405 |
| A | HOH513 |
| A | HOH514 |
| site_id | AC2 |
| Number of Residues | 15 |
| Details | binding site for residue PIS A 402 |
| Chain | Residue |
| A | LYS80 |
| A | HIS93 |
| A | ARG127 |
| A | MG401 |
| A | 61G403 |
| A | ISY405 |
| A | HOH501 |
| A | HOH509 |
| A | HOH513 |
| A | HOH514 |
| A | HOH517 |
| A | ASP76 |
| A | GLY77 |
| A | HIS78 |
| A | ARG79 |
| site_id | AC3 |
| Number of Residues | 7 |
| Details | binding site for residue 61G A 403 |
| Chain | Residue |
| A | HIS78 |
| A | ALA119 |
| A | ASN124 |
| A | ARG127 |
| A | TYR139 |
| A | PIS402 |
| A | HOH562 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 404 |
| Chain | Residue |
| A | HIS190 |
| A | THR238 |
| A | LYS239 |
| A | HOH503 |
| site_id | AC5 |
| Number of Residues | 20 |
| Details | binding site for residue ISY A 405 |
| Chain | Residue |
| A | ILE74 |
| A | ILE75 |
| A | ASP76 |
| A | TRP118 |
| A | SER121 |
| A | ASN124 |
| A | ARG127 |
| A | ARG248 |
| A | ARG254 |
| A | SER256 |
| A | GLY296 |
| A | PHE297 |
| A | GLY298 |
| A | MG401 |
| A | PIS402 |
| A | HOH513 |
| A | HOH514 |
| A | HOH525 |
| A | HOH531 |
| A | HOH546 |
