5H8K
Crystal structure of Medicago truncatula N-carbamoylputrescine amidohydrolase (MtCPA) C158S mutant
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0006596 | biological_process | polyamine biosynthetic process |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
A | 0033388 | biological_process | putrescine biosynthetic process from arginine |
A | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
B | 0006596 | biological_process | polyamine biosynthetic process |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
B | 0033388 | biological_process | putrescine biosynthetic process from arginine |
B | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
C | 0006596 | biological_process | polyamine biosynthetic process |
C | 0016787 | molecular_function | hydrolase activity |
C | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
C | 0033388 | biological_process | putrescine biosynthetic process from arginine |
C | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
D | 0006596 | biological_process | polyamine biosynthetic process |
D | 0016787 | molecular_function | hydrolase activity |
D | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
D | 0033388 | biological_process | putrescine biosynthetic process from arginine |
D | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
E | 0006596 | biological_process | polyamine biosynthetic process |
E | 0016787 | molecular_function | hydrolase activity |
E | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
E | 0033388 | biological_process | putrescine biosynthetic process from arginine |
E | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
F | 0006596 | biological_process | polyamine biosynthetic process |
F | 0016787 | molecular_function | hydrolase activity |
F | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
F | 0033388 | biological_process | putrescine biosynthetic process from arginine |
F | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
G | 0006596 | biological_process | polyamine biosynthetic process |
G | 0016787 | molecular_function | hydrolase activity |
G | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
G | 0033388 | biological_process | putrescine biosynthetic process from arginine |
G | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
H | 0006596 | biological_process | polyamine biosynthetic process |
H | 0016787 | molecular_function | hydrolase activity |
H | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
H | 0033388 | biological_process | putrescine biosynthetic process from arginine |
H | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
I | 0006596 | biological_process | polyamine biosynthetic process |
I | 0016787 | molecular_function | hydrolase activity |
I | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
I | 0033388 | biological_process | putrescine biosynthetic process from arginine |
I | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
J | 0006596 | biological_process | polyamine biosynthetic process |
J | 0016787 | molecular_function | hydrolase activity |
J | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
J | 0033388 | biological_process | putrescine biosynthetic process from arginine |
J | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
K | 0006596 | biological_process | polyamine biosynthetic process |
K | 0016787 | molecular_function | hydrolase activity |
K | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
K | 0033388 | biological_process | putrescine biosynthetic process from arginine |
K | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
L | 0006596 | biological_process | polyamine biosynthetic process |
L | 0016787 | molecular_function | hydrolase activity |
L | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
L | 0033388 | biological_process | putrescine biosynthetic process from arginine |
L | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
M | 0006596 | biological_process | polyamine biosynthetic process |
M | 0016787 | molecular_function | hydrolase activity |
M | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
M | 0033388 | biological_process | putrescine biosynthetic process from arginine |
M | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
N | 0006596 | biological_process | polyamine biosynthetic process |
N | 0016787 | molecular_function | hydrolase activity |
N | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
N | 0033388 | biological_process | putrescine biosynthetic process from arginine |
N | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
O | 0006596 | biological_process | polyamine biosynthetic process |
O | 0016787 | molecular_function | hydrolase activity |
O | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
O | 0033388 | biological_process | putrescine biosynthetic process from arginine |
O | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
P | 0006596 | biological_process | polyamine biosynthetic process |
P | 0016787 | molecular_function | hydrolase activity |
P | 0016810 | molecular_function | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds |
P | 0033388 | biological_process | putrescine biosynthetic process from arginine |
P | 0050126 | molecular_function | N-carbamoylputrescine amidase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | binding site for residue GOL A 401 |
Chain | Residue |
A | SER23 |
A | THR75 |
A | ARG78 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue GOL A 402 |
Chain | Residue |
A | TYR54 |
A | TYR130 |
A | ALA183 |
A | ILE184 |
A | GLY185 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue EDO A 403 |
Chain | Residue |
A | ASP286 |
A | HOH538 |
C | PRO138 |
D | HOH583 |
D | HOH618 |
A | PRO285 |
site_id | AC4 |
Number of Residues | 7 |
Details | binding site for residue GOL B 401 |
Chain | Residue |
A | TRP277 |
B | ASP126 |
B | TYR130 |
B | GLU187 |
B | HOH505 |
B | HOH572 |
B | HOH604 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue GOL B 402 |
Chain | Residue |
A | MET273 |
A | TRP277 |
B | SER195 |
B | HIS198 |
B | HOH559 |
B | HOH561 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue GOL B 403 |
Chain | Residue |
B | ALA171 |
B | LEU172 |
B | ARG274 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue GOL B 404 |
Chain | Residue |
B | GLU51 |
B | ARG66 |
B | HOH551 |
B | HOH566 |
site_id | AC8 |
Number of Residues | 4 |
Details | binding site for residue GOL B 405 |
Chain | Residue |
B | TYR70 |
B | HOH537 |
B | HOH571 |
B | HOH633 |
site_id | AC9 |
Number of Residues | 8 |
Details | binding site for residue GOL C 401 |
Chain | Residue |
C | ASP126 |
C | TRP159 |
C | GLU187 |
C | HOH501 |
C | HOH544 |
C | HOH599 |
C | HOH643 |
D | TRP277 |
site_id | AD1 |
Number of Residues | 4 |
Details | binding site for residue GOL C 402 |
Chain | Residue |
C | MET273 |
C | TRP277 |
C | HOH615 |
D | HIS198 |
site_id | AD2 |
Number of Residues | 4 |
Details | binding site for residue GOL C 403 |
Chain | Residue |
C | SER23 |
C | THR75 |
C | ARG78 |
C | HOH527 |
site_id | AD3 |
Number of Residues | 4 |
Details | binding site for residue PEG C 404 |
Chain | Residue |
C | TYR70 |
C | ASP115 |
C | LEU116 |
C | HOH683 |
site_id | AD4 |
Number of Residues | 6 |
Details | binding site for residue EDO C 405 |
Chain | Residue |
C | PRO285 |
C | ASP286 |
C | HOH579 |
C | HOH616 |
E | HOH632 |
F | HOH531 |
site_id | AD5 |
Number of Residues | 6 |
Details | binding site for residue GOL D 401 |
Chain | Residue |
C | TRP277 |
D | ASP126 |
D | TYR130 |
D | GLU187 |
D | HOH501 |
D | HOH648 |
site_id | AD6 |
Number of Residues | 6 |
Details | binding site for residue GOL D 402 |
Chain | Residue |
C | ILE193 |
C | HIS198 |
D | MET273 |
D | TRP277 |
D | HOH542 |
D | HOH562 |
site_id | AD7 |
Number of Residues | 4 |
Details | binding site for residue GOL D 403 |
Chain | Residue |
D | SER23 |
D | THR75 |
D | ARG78 |
D | HOH647 |
site_id | AD8 |
Number of Residues | 6 |
Details | binding site for residue GOL D 404 |
Chain | Residue |
C | ARG201 |
C | HOH602 |
D | GLN204 |
D | GLU248 |
D | ILE249 |
D | HOH554 |
site_id | AD9 |
Number of Residues | 6 |
Details | binding site for residue EDO D 405 |
Chain | Residue |
A | HOH521 |
C | VAL300 |
D | PRO285 |
D | ASP286 |
D | HOH543 |
D | HOH679 |
site_id | AE1 |
Number of Residues | 6 |
Details | binding site for residue GOL E 401 |
Chain | Residue |
E | ASP126 |
E | TYR130 |
E | GLU187 |
E | HOH517 |
E | HOH542 |
F | TRP277 |
site_id | AE2 |
Number of Residues | 4 |
Details | binding site for residue GOL E 402 |
Chain | Residue |
E | TRP277 |
E | HOH524 |
F | HIS198 |
E | MET273 |
site_id | AE3 |
Number of Residues | 5 |
Details | binding site for residue GOL E 403 |
Chain | Residue |
E | SER23 |
E | PRO74 |
E | THR75 |
E | ARG78 |
E | HOH588 |
site_id | AE4 |
Number of Residues | 1 |
Details | binding site for residue GOL E 404 |
Chain | Residue |
E | GLY113 |
site_id | AE5 |
Number of Residues | 9 |
Details | binding site for residue GOL F 401 |
Chain | Residue |
E | TRP277 |
E | HOH649 |
F | ASP126 |
F | TYR130 |
F | TRP159 |
F | GLU187 |
F | HOH518 |
F | HOH581 |
F | HOH627 |
site_id | AE6 |
Number of Residues | 5 |
Details | binding site for residue GOL F 402 |
Chain | Residue |
E | HIS198 |
F | MET273 |
F | TRP277 |
F | HOH503 |
F | HOH534 |
site_id | AE7 |
Number of Residues | 5 |
Details | binding site for residue GOL F 403 |
Chain | Residue |
F | VAL22 |
F | SER23 |
F | PRO74 |
F | THR75 |
F | ARG78 |
site_id | AE8 |
Number of Residues | 7 |
Details | binding site for residue GOL G 401 |
Chain | Residue |
G | PRO125 |
G | ASP126 |
G | TYR130 |
G | TRP159 |
G | GLU187 |
G | HOH540 |
H | TRP277 |
site_id | AE9 |
Number of Residues | 4 |
Details | binding site for residue GOL G 402 |
Chain | Residue |
G | SER195 |
G | HIS198 |
H | MET273 |
H | TRP277 |
site_id | AF1 |
Number of Residues | 6 |
Details | binding site for residue GOL G 403 |
Chain | Residue |
G | LYS256 |
G | GLU257 |
G | HOH519 |
G | HOH529 |
L | LEU32 |
L | GLU258 |
site_id | AF2 |
Number of Residues | 2 |
Details | binding site for residue PEG G 404 |
Chain | Residue |
G | ARG7 |
G | GLN147 |
site_id | AF3 |
Number of Residues | 6 |
Details | binding site for residue GOL I 401 |
Chain | Residue |
I | MET273 |
I | TRP277 |
I | HOH514 |
I | HOH540 |
I | HOH584 |
J | HIS198 |
site_id | AF4 |
Number of Residues | 4 |
Details | binding site for residue GOL I 402 |
Chain | Residue |
I | SER23 |
I | PRO74 |
I | THR75 |
I | ARG78 |
site_id | AF5 |
Number of Residues | 5 |
Details | binding site for residue EDO I 403 |
Chain | Residue |
I | PRO285 |
I | ASP286 |
I | HOH532 |
K | PRO138 |
L | HOH513 |
site_id | AF6 |
Number of Residues | 6 |
Details | binding site for residue GOL J 401 |
Chain | Residue |
I | TRP277 |
I | HOH565 |
J | ASP126 |
J | GLU187 |
J | HOH527 |
J | HOH588 |
site_id | AF7 |
Number of Residues | 5 |
Details | binding site for residue GOL J 402 |
Chain | Residue |
J | ALA171 |
J | ARG274 |
J | PHE280 |
J | HOH572 |
J | HOH606 |
site_id | AF8 |
Number of Residues | 1 |
Details | binding site for residue PEG J 403 |
Chain | Residue |
J | ILE249 |
site_id | AF9 |
Number of Residues | 7 |
Details | binding site for residue GOL K 401 |
Chain | Residue |
K | ASP126 |
K | TYR130 |
K | GLU187 |
K | HOH509 |
K | HOH597 |
K | HOH652 |
L | TRP277 |
site_id | AG1 |
Number of Residues | 6 |
Details | binding site for residue GOL K 402 |
Chain | Residue |
K | MET273 |
K | TRP277 |
K | HOH525 |
K | HOH639 |
L | SER195 |
L | HIS198 |
site_id | AG2 |
Number of Residues | 5 |
Details | binding site for residue GOL K 403 |
Chain | Residue |
K | SER23 |
K | THR75 |
K | ARG78 |
K | HOH502 |
K | HOH529 |
site_id | AG3 |
Number of Residues | 7 |
Details | binding site for residue EDO K 404 |
Chain | Residue |
K | ARG283 |
K | PRO285 |
K | ASP286 |
K | HOH538 |
K | HOH584 |
M | HOH631 |
N | HOH513 |
site_id | AG4 |
Number of Residues | 9 |
Details | binding site for residue GOL L 401 |
Chain | Residue |
K | TRP277 |
L | ASP126 |
L | TYR130 |
L | TRP159 |
L | GLU187 |
L | HOH507 |
L | HOH517 |
L | HOH603 |
L | HOH677 |
site_id | AG5 |
Number of Residues | 5 |
Details | binding site for residue GOL L 402 |
Chain | Residue |
K | HIS198 |
L | MET273 |
L | TRP277 |
L | HOH557 |
L | HOH560 |
site_id | AG6 |
Number of Residues | 6 |
Details | binding site for residue GOL L 403 |
Chain | Residue |
L | SER23 |
L | THR75 |
L | ARG78 |
L | HOH512 |
L | HOH543 |
L | HOH549 |
site_id | AG7 |
Number of Residues | 2 |
Details | binding site for residue PEG L 404 |
Chain | Residue |
L | LYS81 |
L | ASP112 |
site_id | AG8 |
Number of Residues | 7 |
Details | binding site for residue EDO L 405 |
Chain | Residue |
J | HOH616 |
K | VAL300 |
L | ARG283 |
L | PRO285 |
L | ASP286 |
L | HOH514 |
L | HOH579 |
site_id | AG9 |
Number of Residues | 7 |
Details | binding site for residue GOL M 401 |
Chain | Residue |
M | ASP126 |
M | TYR130 |
M | TRP159 |
M | GLU187 |
M | HOH514 |
M | HOH595 |
N | TRP277 |
site_id | AH1 |
Number of Residues | 6 |
Details | binding site for residue GOL M 402 |
Chain | Residue |
M | SER195 |
M | HIS198 |
M | HOH506 |
M | HOH596 |
N | MET273 |
N | TRP277 |
site_id | AH2 |
Number of Residues | 5 |
Details | binding site for residue GOL M 403 |
Chain | Residue |
M | VAL22 |
M | SER23 |
M | THR75 |
M | ARG78 |
M | HOH524 |
site_id | AH3 |
Number of Residues | 8 |
Details | binding site for residue GOL N 401 |
Chain | Residue |
M | TRP277 |
M | HOH579 |
N | ASP126 |
N | TYR130 |
N | TRP159 |
N | GLU187 |
N | HOH518 |
N | HOH559 |
site_id | AH4 |
Number of Residues | 4 |
Details | binding site for residue GOL N 402 |
Chain | Residue |
M | TRP277 |
N | HIS198 |
N | HOH515 |
N | HOH557 |
site_id | AH5 |
Number of Residues | 6 |
Details | binding site for residue GOL N 403 |
Chain | Residue |
N | SER23 |
N | PRO74 |
N | THR75 |
N | ARG78 |
N | HOH578 |
N | HOH609 |
site_id | AH6 |
Number of Residues | 1 |
Details | binding site for residue GOL N 404 |
Chain | Residue |
N | HOH509 |
site_id | AH7 |
Number of Residues | 8 |
Details | binding site for residue GOL O 401 |
Chain | Residue |
O | ASP126 |
O | TRP159 |
O | GLU187 |
O | HOH533 |
O | HOH580 |
O | HOH619 |
P | TRP277 |
P | HOH527 |
site_id | AH8 |
Number of Residues | 5 |
Details | binding site for residue GOL P 401 |
Chain | Residue |
O | SER195 |
O | HIS198 |
P | MET273 |
P | TRP277 |
P | HOH509 |