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5H39

Structural analysis of KSHV thymidylate synthase

Functional Information from GO Data
ChainGOidnamespacecontents
A0004799molecular_functionthymidylate synthase activity
A0006231biological_processdTMP biosynthetic process
A0016741molecular_functiontransferase activity, transferring one-carbon groups
B0004799molecular_functionthymidylate synthase activity
B0006231biological_processdTMP biosynthetic process
B0016741molecular_functiontransferase activity, transferring one-carbon groups
Functional Information from PDB Data
site_idAC1
Number of Residues17
Detailsbinding site for residue UMP A 401
ChainResidue
AARG74
AASN250
AHIS280
ATYR282
AHOH530
AHOH550
AHOH552
BARG199
BARG200
ACYS219
AHIS220
AGLN238
AARG239
ASER240
AGLY241
AASP242
AGLY246

site_idAC2
Number of Residues16
Detailsbinding site for residue UMP B 401
ChainResidue
AARG199
AARG200
BCYS219
BHIS220
BGLN238
BARG239
BSER240
BGLY241
BASP242
BGLY246
BASN250
BHIS280
BTYR282
BHOH516
BHOH573
BHOH583

Functional Information from PROSITE/UniProt
site_idPS00091
Number of Residues29
DetailsTHYMIDYLATE_SYNTHASE Thymidylate synthase active site. RriImcaWNpadlslma.....LpPCHllcQFyV
ChainResidueDetails
AARG199-VAL227

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Nucleophile => ECO:0000250|UniProtKB:P0A884
ChainResidueDetails
ACYS219
BCYS219

site_idSWS_FT_FI2
Number of Residues8
DetailsBINDING: in other chain => ECO:0000250|UniProtKB:P0A884
ChainResidueDetails
AARG74
AARG239
AASN250
AHIS280
BARG74
BARG239
BASN250
BHIS280

site_idSWS_FT_FI3
Number of Residues4
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:P0A884
ChainResidueDetails
AARG199
AASP242
BARG199
BASP242

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PDB entries from 2024-07-24

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