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5GXD

Structure of acryloyl-CoA lyase PrpE from Dinoroseobacter shibae DFL 12

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0016874molecular_functionligase activity
A0050218molecular_functionpropionate-CoA ligase activity
Functional Information from PDB Data
site_idAC1
Number of Residues20
Detailsbinding site for residue AMP A 701
ChainResidue
AVAL285
ATHR391
AASP478
AARG493
AASN499
AARG504
AAKR702
AHOH876
AHOH892
AHOH902
AHOH991
AGLY365
AHOH1074
AGLU366
AARG367
AASP386
AHIS387
ATRP388
ATRP389
AGLN390

site_idAC2
Number of Residues10
Detailsbinding site for residue AKR A 702
ChainResidue
ATRP284
AVAL285
AVAL286
AGLY365
AGLY502
AHIS503
AARG504
AAMP701
ACOA703
AHOH1002

site_idAC3
Number of Residues27
Detailsbinding site for residue COA A 703
ChainResidue
APHE140
AGLY141
AGLY142
AGLU168
AARG171
ASER280
ALYS308
APRO309
ATHR335
AALA364
AALA501
AHIS503
ALYS533
AARG563
APRO568
AVAL569
ALYS573
AAKR702
AHOH842
AHOH863
AHOH900
AHOH934
AHOH936
AHOH1052
AHOH1109
AHOH1110
AHOH1170

site_idAC4
Number of Residues3
Detailsbinding site for residue GOL A 704
ChainResidue
AARG69
AHOH804
AHOH982

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL A 705
ChainResidue
AGLU147
ATHR239
AGLY241
ATHR242
APRO246
ALYS247

site_idAC6
Number of Residues3
Detailsbinding site for residue GOL A 706
ChainResidue
AARG171
AARG563
AHOH836

site_idAC7
Number of Residues3
Detailsbinding site for residue GOL A 707
ChainResidue
AGLN23
AALA24
AASP26

site_idAC8
Number of Residues7
Detailsbinding site for residue GOL A 708
ChainResidue
AHIS232
APRO233
AHOH832
AHOH878
AHOH941
AHOH1015
AHOH1085

Functional Information from PROSITE/UniProt
site_idPS00455
Number of Residues12
DetailsAMP_BINDING Putative AMP-binding domain signature. ILYTSGTTGqPK
ChainResidueDetails
AILE236-LYS247

224004

PDB entries from 2024-08-21

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