Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GN9

Crystal structure of alternative oxidase from Trypanosoma brucei brucei complexed with cumarin derivative-17b

Functional Information from GO Data
ChainGOidnamespacecontents
A0005739cellular_componentmitochondrion
A0005743cellular_componentmitochondrial inner membrane
A0008199molecular_functionferric iron binding
A0009916molecular_functionalternative oxidase activity
A0010230biological_processalternative respiration
A0016491molecular_functionoxidoreductase activity
A0046872molecular_functionmetal ion binding
B0005739cellular_componentmitochondrion
B0005743cellular_componentmitochondrial inner membrane
B0008199molecular_functionferric iron binding
B0009916molecular_functionalternative oxidase activity
B0010230biological_processalternative respiration
B0016491molecular_functionoxidoreductase activity
B0046872molecular_functionmetal ion binding
C0005739cellular_componentmitochondrion
C0005743cellular_componentmitochondrial inner membrane
C0008199molecular_functionferric iron binding
C0009916molecular_functionalternative oxidase activity
C0010230biological_processalternative respiration
C0016491molecular_functionoxidoreductase activity
C0046872molecular_functionmetal ion binding
D0005739cellular_componentmitochondrion
D0005743cellular_componentmitochondrial inner membrane
D0008199molecular_functionferric iron binding
D0009916molecular_functionalternative oxidase activity
D0010230biological_processalternative respiration
D0016491molecular_functionoxidoreductase activity
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue FE A 501
ChainResidue
AGLU123
AGLU162
AHIS165
AGLU266
AFE502
A6Y0503

site_idAC2
Number of Residues5
Detailsbinding site for residue FE A 502
ChainResidue
AFE501
A6Y0503
AGLU162
AGLU213
AGLU266

site_idAC3
Number of Residues14
Detailsbinding site for residue 6Y0 A 503
ChainResidue
AARG96
AARG118
ACYS119
ALEU122
AGLU123
AALA126
AGLU162
AGLU213
AALA216
ATHR219
ATYR220
AGLU266
AFE501
AFE502

site_idAC4
Number of Residues6
Detailsbinding site for residue FE B 501
ChainResidue
BGLU123
BGLU162
BHIS165
BGLU266
BFE502
B6Y0503

site_idAC5
Number of Residues5
Detailsbinding site for residue FE B 502
ChainResidue
BGLU162
BGLU213
BGLU266
BFE501
B6Y0503

site_idAC6
Number of Residues12
Detailsbinding site for residue 6Y0 B 503
ChainResidue
BARG96
BARG118
BGLU123
BGLU162
BLEU212
BGLU213
BALA216
BTHR219
BTYR220
BGLU266
BFE501
BFE502

site_idAC7
Number of Residues5
Detailsbinding site for residue FE C 501
ChainResidue
CGLU123
CGLU162
CGLU266
CFE502
C6Y0503

site_idAC8
Number of Residues5
Detailsbinding site for residue FE C 502
ChainResidue
CGLU162
CGLU213
CGLU266
CFE501
C6Y0503

site_idAC9
Number of Residues12
Detailsbinding site for residue 6Y0 C 503
ChainResidue
CARG96
CCYS119
CLEU122
CGLU123
CLEU212
CGLU213
CALA216
CTHR219
CTYR220
CGLU266
CFE501
CFE502

site_idAD1
Number of Residues6
Detailsbinding site for residue FE D 501
ChainResidue
DGLU123
DGLU162
DHIS165
DGLU266
DFE502
D6Y0503

site_idAD2
Number of Residues5
Detailsbinding site for residue FE D 502
ChainResidue
DGLU162
DGLU213
DGLU266
DFE501
D6Y0503

site_idAD3
Number of Residues13
Detailsbinding site for residue 6Y0 D 503
ChainResidue
DCYS119
DLEU122
DGLU123
DALA126
DGLU162
DLEU212
DGLU213
DALA216
DTHR219
DTYR220
DGLU266
DFE501
DFE502

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues160
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
AVAL115-MET135
AVAL181-SER201
BVAL115-MET135
BVAL181-SER201
CVAL115-MET135
CVAL181-SER201
DVAL115-MET135
DVAL181-SER201

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000269|PubMed:23487766, ECO:0007744|PDB:3W54
ChainResidueDetails
AGLU123
BGLU213
BGLU266
BHIS269
CGLU123
CGLU162
CHIS165
CGLU213
CGLU266
CHIS269
DGLU123
AGLU162
DGLU162
DHIS165
DGLU213
DGLU266
DHIS269
AHIS165
AGLU213
AGLU266
AHIS269
BGLU123
BGLU162
BHIS165

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon