5GM8
Methylation at position 32 of tRNA catalyzed by TrmJ alters oxidative stress response in Pseudomonas aeruiginosa
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003723 | molecular_function | RNA binding |
| A | 0006396 | biological_process | RNA processing |
| A | 0008173 | molecular_function | RNA methyltransferase activity |
| B | 0003723 | molecular_function | RNA binding |
| B | 0006396 | biological_process | RNA processing |
| B | 0008173 | molecular_function | RNA methyltransferase activity |
| C | 0003723 | molecular_function | RNA binding |
| C | 0006396 | biological_process | RNA processing |
| C | 0008173 | molecular_function | RNA methyltransferase activity |
| D | 0003723 | molecular_function | RNA binding |
| D | 0006396 | biological_process | RNA processing |
| D | 0008173 | molecular_function | RNA methyltransferase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 18 |
| Details | binding site for residue SFG A 500 |
| Chain | Residue |
| A | THR79 |
| A | VAL133 |
| A | HIS134 |
| A | ILE135 |
| A | GLY142 |
| A | SER143 |
| A | LEU144 |
| A | ALA149 |
| A | HOH601 |
| A | HOH605 |
| A | SER80 |
| A | ALA81 |
| A | ARG82 |
| A | PHE114 |
| A | GLY115 |
| A | ARG116 |
| A | GLU117 |
| A | GLY120 |
| site_id | AC2 |
| Number of Residues | 20 |
| Details | binding site for residue SFG B 500 |
| Chain | Residue |
| B | THR79 |
| B | SER80 |
| B | ALA81 |
| B | ARG82 |
| B | PHE114 |
| B | GLY115 |
| B | ARG116 |
| B | GLU117 |
| B | TYR118 |
| B | GLY120 |
| B | VAL133 |
| B | HIS134 |
| B | ILE135 |
| B | SER137 |
| B | SER143 |
| B | LEU144 |
| B | ALA149 |
| B | HOH604 |
| B | HOH613 |
| B | HOH618 |
| site_id | AC3 |
| Number of Residues | 20 |
| Details | binding site for residue SFG C 500 |
| Chain | Residue |
| C | THR79 |
| C | SER80 |
| C | ALA81 |
| C | ARG82 |
| C | PHE114 |
| C | GLY115 |
| C | ARG116 |
| C | GLU117 |
| C | TYR118 |
| C | GLY120 |
| C | VAL133 |
| C | HIS134 |
| C | ILE135 |
| C | SER137 |
| C | GLY142 |
| C | SER143 |
| C | LEU144 |
| C | ALA149 |
| C | HOH612 |
| C | HOH614 |
| site_id | AC4 |
| Number of Residues | 18 |
| Details | binding site for residue SFG D 500 |
| Chain | Residue |
| D | THR79 |
| D | SER80 |
| D | ALA81 |
| D | PHE114 |
| D | GLY115 |
| D | ARG116 |
| D | GLU117 |
| D | TYR118 |
| D | GLY120 |
| D | VAL133 |
| D | HIS134 |
| D | ILE135 |
| D | SER137 |
| D | GLY142 |
| D | SER143 |
| D | LEU144 |
| D | ALA149 |
| D | HOH617 |
