5GKF
Structure of EndoMS-dsDNA1' complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000014 | molecular_function | single-stranded DNA endodeoxyribonuclease activity |
| A | 0003676 | molecular_function | nucleic acid binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0004518 | molecular_function | nuclease activity |
| A | 0004519 | molecular_function | endonuclease activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006259 | biological_process | DNA metabolic process |
| A | 0016787 | molecular_function | hydrolase activity |
| B | 0000014 | molecular_function | single-stranded DNA endodeoxyribonuclease activity |
| B | 0003676 | molecular_function | nucleic acid binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0004518 | molecular_function | nuclease activity |
| B | 0004519 | molecular_function | endonuclease activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006259 | biological_process | DNA metabolic process |
| B | 0016787 | molecular_function | hydrolase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 5 |
| Details | binding site for residue MPD A 301 |
| Chain | Residue |
| A | THR10 |
| A | GLU16 |
| B | GLU147 |
| B | SER171 |
| B | ASP172 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue MG A 302 |
| Chain | Residue |
| D | DG5 |
| D | DA6 |
| A | GLU179 |
| A | GLN192 |
| C | DA5 |
| C | DC6 |
| site_id | AC3 |
| Number of Residues | 6 |
| Details | binding site for residue MG B 301 |
| Chain | Residue |
| B | GLU179 |
| B | GLN192 |
| C | DA5 |
| C | DC6 |
| D | DG5 |
| D | DA6 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue MPD C 101 |
| Chain | Residue |
| A | GLU156 |
| C | DA5 |
| C | DC6 |
| C | DG12 |
| C | DT13 |
| D | DG5 |
| D | DA6 |
| site_id | AC5 |
| Number of Residues | 8 |
| Details | binding site for residue MPD C 102 |
| Chain | Residue |
| B | GLU156 |
| C | DA5 |
| C | DC6 |
| C | DG12 |
| D | DG5 |
| D | DA6 |
| D | DA12 |
| D | DG13 |
| site_id | AC6 |
| Number of Residues | 8 |
| Details | binding site for residue MPD D 101 |
| Chain | Residue |
| A | GLU73 |
| A | TRP77 |
| B | ARG72 |
| C | DA7 |
| C | DG9 |
| C | DC11 |
| D | DC7 |
| D | DG10 |
| site_id | AC7 |
| Number of Residues | 11 |
| Details | binding site for residue MPD D 102 |
| Chain | Residue |
| A | ARG72 |
| B | GLU73 |
| B | TRP77 |
| C | DA7 |
| C | DT8 |
| C | DG9 |
| C | DT10 |
| C | DC11 |
| D | DC7 |
| D | DT8 |
| D | DT11 |
