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5GK7

Structure of E.Coli fructose 1,6-bisphosphate aldolase bound to Tris

Functional Information from GO Data
ChainGOidnamespacecontents
A0004332molecular_functionfructose-bisphosphate aldolase activity
A0005515molecular_functionprotein binding
A0005829cellular_componentcytosol
A0005975biological_processcarbohydrate metabolic process
A0006094biological_processgluconeogenesis
A0006096biological_processglycolytic process
A0008270molecular_functionzinc ion binding
A0016829molecular_functionlyase activity
A0016832molecular_functionaldehyde-lyase activity
A0042802molecular_functionidentical protein binding
A0042803molecular_functionprotein homodimerization activity
A0046872molecular_functionmetal ion binding
B0004332molecular_functionfructose-bisphosphate aldolase activity
B0005515molecular_functionprotein binding
B0005829cellular_componentcytosol
B0005975biological_processcarbohydrate metabolic process
B0006094biological_processgluconeogenesis
B0006096biological_processglycolytic process
B0008270molecular_functionzinc ion binding
B0016829molecular_functionlyase activity
B0016832molecular_functionaldehyde-lyase activity
B0042802molecular_functionidentical protein binding
B0042803molecular_functionprotein homodimerization activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues7
Detailsbinding site for residue GOL A 401
ChainResidue
AGLN18
APRO214
ASER258
ALEU259
AHOH518
AHOH528
AHOH543

site_idAC2
Number of Residues9
Detailsbinding site for residue TRS A 402
ChainResidue
AGLY265
AZN404
AHOH501
AHOH502
AHOH504
AHOH508
AHOH509
AHIS110
AHIS264

site_idAC3
Number of Residues8
Detailsbinding site for residue PEG A 403
ChainResidue
ASER88
AHIS91
AHIS92
AGLN95
BSER88
BHIS91
BHIS92
BGLN95

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN A 404
ChainResidue
AHIS110
AHIS264
ATRS402
AHOH508

site_idAC5
Number of Residues7
Detailsbinding site for residue TRS B 401
ChainResidue
BHIS110
BHIS264
BGLY265
BZN402
BHOH503
BHOH529
BHOH536

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN B 402
ChainResidue
BHIS110
BHIS264
BTRS401
BHOH529

Functional Information from PROSITE/UniProt
site_idPS00602
Number of Residues12
DetailsALDOLASE_CLASS_II_1 Fructose-bisphosphate aldolase class-II signature 1. Yg..VPVi.LHtDHC
ChainResidueDetails
ATYR100-CYS111

site_idPS00806
Number of Residues12
DetailsALDOLASE_CLASS_II_2 Fructose-bisphosphate aldolase class-II signature 2. LEiELGctGGeE
ChainResidueDetails
ALEU171-GLU182

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: Proton donor => ECO:0000269|PubMed:10080900
ChainResidueDetails
AASP109
BASP109

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
ASER61
BSER61

site_idSWS_FT_FI3
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:10080900, ECO:0000269|PubMed:8836102, ECO:0000269|PubMed:8939754
ChainResidueDetails
AHIS110
BHIS264
AASP144
AGLU174
AHIS226
AHIS264
BHIS110
BASP144
BGLU174
BHIS226

site_idSWS_FT_FI4
Number of Residues6
DetailsBINDING:
ChainResidueDetails
AGLY227
AGLY265
AASN286
BGLY227
BGLY265
BASN286

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000269|PubMed:21151122
ChainResidueDetails
ALYS8
BLYS8

site_idSWS_FT_FI6
Number of Residues14
DetailsMOD_RES: N6-succinyllysine => ECO:0000269|PubMed:21151122
ChainResidueDetails
ALYS71
BLYS230
BLYS250
BLYS318
BLYS325
BLYS347
ALYS114
ALYS230
ALYS250
ALYS318
ALYS325
ALYS347
BLYS71
BLYS114

Catalytic Information from CSA
site_idMCSA1
Number of Residues6
DetailsM-CSA 52
ChainResidueDetails
AASP109hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AHIS110metal ligand
AGLU182hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AHIS226metal ligand
AHIS264metal ligand
AASN286electrostatic stabiliser, hydrogen bond donor, steric role

site_idMCSA2
Number of Residues6
DetailsM-CSA 52
ChainResidueDetails
BASP109hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BHIS110metal ligand
BGLU182hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BHIS226metal ligand
BHIS264metal ligand
BASN286electrostatic stabiliser, hydrogen bond donor, steric role

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PDB entries from 2024-07-17

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