5GHL
Crystal structure Analysis of the starch-binding domain of glucoamylase from Aspergillus niger
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0030246 | molecular_function | carbohydrate binding |
| A | 2001070 | molecular_function | starch binding |
| B | 0030246 | molecular_function | carbohydrate binding |
| B | 2001070 | molecular_function | starch binding |
| C | 0030246 | molecular_function | carbohydrate binding |
| C | 2001070 | molecular_function | starch binding |
| D | 0030246 | molecular_function | carbohydrate binding |
| D | 2001070 | molecular_function | starch binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 2 |
| Details | binding site for residue GOL A 1001 |
| Chain | Residue |
| A | THR525 |
| A | TRP563 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 A 1002 |
| Chain | Residue |
| A | ARG596 |
| A | ASP613 |
| A | THR614 |
| A | HOH1125 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue GOL B 1001 |
| Chain | Residue |
| B | THR525 |
| B | THR526 |
| B | TRP563 |
| site_id | AC4 |
| Number of Residues | 7 |
| Details | binding site for residue SO4 B 1002 |
| Chain | Residue |
| B | ARG596 |
| B | THR612 |
| B | ASP613 |
| B | THR614 |
| B | HOH1101 |
| B | HOH1102 |
| C | SER558 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue GOL C 1001 |
| Chain | Residue |
| C | THR525 |
| C | THR526 |
| C | PRO601 |
| C | HOH1117 |
| site_id | AC6 |
| Number of Residues | 7 |
| Details | binding site for residue SO4 C 1002 |
| Chain | Residue |
| C | ARG596 |
| C | THR612 |
| C | ASP613 |
| C | THR614 |
| C | HOH1121 |
| C | HOH1130 |
| C | HOH1149 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | binding site for residue GOL D 1001 |
| Chain | Residue |
| D | THR525 |
| D | THR526 |
| D | TYR556 |
| D | PRO601 |
| D | HOH1103 |
| D | HOH1111 |
| site_id | AC8 |
| Number of Residues | 8 |
| Details | binding site for residue SO4 D 1002 |
| Chain | Residue |
| A | SER558 |
| D | ARG596 |
| D | ASP613 |
| D | THR614 |
| D | HOH1121 |
| D | HOH1133 |
| D | HOH1138 |
| D | HOH1147 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 428 |
| Details | Domain: {"description":"CBM20","evidences":[{"source":"PROSITE-ProRule","id":"PRU00594","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 96 |
| Details | Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 48 |
| Details | Compositional bias: {"description":"Polar residues","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 8 |
| Details | Glycosylation: {"description":"O-linked (Man) threonine","evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"journal article","publicationDate":"1983","firstPage":"529","lastPage":"544","volume":"48","journal":"Carlsberg Res. Commun.","title":"The complete amino acid sequence of the glycoprotein, glucoamylase G1, from Aspergillus niger.","authors":["Svensson B.","Larsen K.","Svendsen I.","Boel E."]}}]} |
| Chain | Residue | Details |
