Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GGD

Crystal structure of Mycobacterium smegmatis MutT1 in complex with phosphate and magnesium ions (excess magnesium, II)

Functional Information from GO Data
ChainGOidnamespacecontents
A0006260biological_processDNA replication
A0006281biological_processDNA repair
A0008413molecular_function8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
A0016787molecular_functionhydrolase activity
A0044715molecular_function8-oxo-dGDP phosphatase activity
A0044716molecular_function8-oxo-GDP phosphatase activity
A0046872molecular_functionmetal ion binding
B0006260biological_processDNA replication
B0006281biological_processDNA repair
B0008413molecular_function8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
B0016787molecular_functionhydrolase activity
B0044715molecular_function8-oxo-dGDP phosphatase activity
B0044716molecular_function8-oxo-GDP phosphatase activity
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue PO4 A 401
ChainResidue
ALYS65
AHOH548
AHOH584
AHOH591
AHOH699
AGLY66
ALYS67
AGLU81
AGLU85
AGLU127
AMG402
AMG403
AMG404

site_idAC2
Number of Residues7
Detailsbinding site for residue MG A 402
ChainResidue
ALYS65
AGLU85
AGLU127
APO4401
AMG403
AHOH547
AHOH591

site_idAC3
Number of Residues7
Detailsbinding site for residue MG A 403
ChainResidue
AGLU81
AGLU85
AGLU127
APO4401
AMG402
AMG404
AHOH584

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 404
ChainResidue
AGLU81
APO4401
AMG403
AHOH502
AHOH601
AHOH699

site_idAC5
Number of Residues11
Detailsbinding site for residue PO4 B 401
ChainResidue
BLYS65
BGLY66
BLYS67
BGLU81
BGLU85
BGLU127
BMG402
BMG403
BMG404
BHOH535
BHOH548

site_idAC6
Number of Residues7
Detailsbinding site for residue MG B 402
ChainResidue
BLYS65
BGLU85
BGLU127
BPO4401
BMG403
BHOH510
BHOH548

site_idAC7
Number of Residues7
Detailsbinding site for residue MG B 403
ChainResidue
BGLU81
BGLU85
BGLU127
BPO4401
BMG402
BMG404
BHOH535

site_idAC8
Number of Residues7
Detailsbinding site for residue MG B 404
ChainResidue
BGLU81
BGLU84
BPO4401
BMG403
BHOH546
BHOH587
BHOH699

Functional Information from PROSITE/UniProt
site_idPS00893
Number of Residues22
DetailsNUDIX_BOX Nudix box signature. GkldqgEtepvAAaREIhEEtG
ChainResidueDetails
AGLY66-GLY87

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000269|PubMed:28375146, ECO:0000269|PubMed:28705712
ChainResidueDetails
AARG55
BLYS65
BGLU81
BGLU85
BTYR101
BLYS108
BGLU127
BTYR145
ALYS65
AGLU81
AGLU85
ATYR101
ALYS108
AGLU127
ATYR145
BARG55

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:28375146
ChainResidueDetails
AASP60
BASP60

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon