5GG5

Crystal structure of Mycobacterium smegmatis MutT1

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0006260	biological_process	DNA replication
A	0006281	biological_process	DNA repair
A	0006974	biological_process	DNA damage response
A	0008413	molecular_function	8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
A	0016787	molecular_function	hydrolase activity
A	0044715	molecular_function	8-oxo-dGDP phosphatase activity
A	0044716	molecular_function	8-oxo-GDP phosphatase activity
A	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	9
Details	binding site for residue SO4 A 401

Chain	Residue
A	GLN144
A	ARG169
A	HIS170
A	ARG176
A	ARG186
A	ARG218
A	LYS297
A	HOH558
A	HOH624

---

site_id	AC2
Number of Residues	6
Details	binding site for residue SO4 A 402

Chain	Residue
A	PRO146
A	ARG149
A	ARG153
A	ARG178
A	EDO412
A	HOH566

---

site_id	AC3
Number of Residues	10
Details	binding site for residue SO4 A 403

Chain	Residue
A	ARG176
A	ARG184
A	ARG216
A	GLU242
A	GLU243
A	GLN271
A	HOH518
A	HOH520
A	HOH564
A	HOH729

---

site_id	AC4
Number of Residues	9
Details	binding site for residue SO4 A 404

Chain	Residue
A	HIS88
A	ASP121
A	PHE122
A	TRP133
A	EDO418
A	EDO419
A	HOH525
A	HOH532
A	HOH565

---

site_id	AC5
Number of Residues	3
Details	binding site for residue SO4 A 405

Chain	Residue
A	ARG98
A	THR100
A	ARG109

---

site_id	AC6
Number of Residues	6
Details	binding site for residue SO4 A 406

Chain	Residue
A	ARG55
A	EDO417
A	EDO421
A	EDO422
A	HOH533
A	HOH644

---

site_id	AC7
Number of Residues	6
Details	binding site for residue SO4 A 407

Chain	Residue
A	LYS67
A	LYS108
A	TYR245
A	LYS273
A	HOH533
A	HOH656

---

site_id	AC8
Number of Residues	6
Details	binding site for residue SO4 A 408

Chain	Residue
A	SER123
A	ASP189
A	LYS190
A	ARG193
A	HOH517
A	HOH582

---

site_id	AC9
Number of Residues	5
Details	binding site for residue SO4 A 409

Chain	Residue
A	GLY174
A	ARG175
A	EDO428
A	HOH591
A	HOH664

---

site_id	AD1
Number of Residues	10
Details	binding site for residue SO4 A 410

Chain	Residue
A	VAL156
A	LYS157
A	ARG158
A	PRO159
A	GLU258
A	GLY261
A	ARG262
A	EDO413
A	HOH514
A	HOH568

---

site_id	AD2
Number of Residues	5
Details	binding site for residue SO4 A 411

Chain	Residue
A	GLY66
A	LYS67
A	EDO421
A	HOH513
A	HOH516

---

site_id	AD3
Number of Residues	4
Details	binding site for residue EDO A 412

Chain	Residue
A	THR89
A	SER177
A	ARG178
A	SO4402

---

site_id	AD4
Number of Residues	5
Details	binding site for residue EDO A 413

Chain	Residue
A	PHE155
A	VAL156
A	ARG158
A	GLU258
A	SO4410

---

site_id	AD5
Number of Residues	6
Details	binding site for residue EDO A 414

Chain	Residue
A	LYS157
A	THR209
A	LEU230
A	GLN232
A	EDO434
A	HOH638

---

site_id	AD6
Number of Residues	5
Details	binding site for residue EDO A 415

Chain	Residue
A	LYS150
A	ARG153
A	MET204
A	GLU229
A	HOH593

---

site_id	AD7
Number of Residues	9
Details	binding site for residue EDO A 416

Chain	Residue
A	ASP121
A	PHE122
A	SER123
A	ASN125
A	HOH511
A	GLU84
A	GLU85
A	THR86
A	GLY87

---

site_id	AD8
Number of Residues	4
Details	binding site for residue EDO A 417

Chain	Residue
A	LYS65
A	TYR101
A	TYR145
A	SO4406

---

site_id	AD9
Number of Residues	4
Details	binding site for residue EDO A 418

Chain	Residue
A	LEU131
A	SO4404
A	EDO419
A	HOH535

---

site_id	AE1
Number of Residues	3
Details	binding site for residue EDO A 419

Chain	Residue
A	ARG33
A	SO4404
A	EDO418

---

site_id	AE2
Number of Residues	5
Details	binding site for residue EDO A 420

Chain	Residue
A	ALA79
A	ARG178
A	TYR179
A	ALA201
A	HOH546

---

site_id	AE3
Number of Residues	5
Details	binding site for residue EDO A 421

Chain	Residue
A	LYS67
A	LYS108
A	SO4406
A	SO4411
A	EDO422

---

site_id	AE4
Number of Residues	6
Details	binding site for residue EDO A 422

Chain	Residue
A	TYR101
A	LYS108
A	LYS273
A	SO4406
A	EDO421
A	HOH682

---

site_id	AE5
Number of Residues	3
Details	binding site for residue EDO A 423

Chain	Residue
A	GLU280
A	THR293
A	EDO429

---

site_id	AE6
Number of Residues	7
Details	binding site for residue EDO A 424

Chain	Residue
A	TRP32
A	VAL91
A	GLY93
A	VAL160
A	THR162
A	HOH609
A	HOH712

---

site_id	AE7
Number of Residues	6
Details	binding site for residue EDO A 425

Chain	Residue
A	TYR145
A	ARG169
A	ARG176
A	GLU242
A	GLY272
A	HOH551

---

site_id	AE8
Number of Residues	6
Details	binding site for residue EDO A 426

Chain	Residue
A	THR210
A	LEU211
A	TYR212
A	GLN232
A	LEU233
A	ASP307

---

site_id	AE9
Number of Residues	6
Details	binding site for residue EDO A 427

Chain	Residue
A	GLY97
A	ARG98
A	LYS150
A	GLN228
A	GLU229
A	GLU291

---

site_id	AF1
Number of Residues	6
Details	binding site for residue EDO A 428

Chain	Residue
A	HIS83
A	ARG149
A	ARG175
A	ARG176
A	SO4409
A	HOH604

---

site_id	AF2
Number of Residues	5
Details	binding site for residue EDO A 429

Chain	Residue
A	PRO56
A	THR293
A	GLY294
A	EDO423
A	HOH677

---

site_id	AF3
Number of Residues	4
Details	binding site for residue EDO A 430

Chain	Residue
A	GLN142
A	GLN144
A	HOH508
A	HOH667

---

site_id	AF4
Number of Residues	3
Details	binding site for residue EDO A 431

Chain	Residue
A	LYS190
A	ARG193
A	HOH585

---

site_id	AF5
Number of Residues	5
Details	binding site for residue EDO A 432

Chain	Residue
A	LEU257
A	GLY261
A	GLY308
A	HOH515
A	HOH719

---

site_id	AF6
Number of Residues	4
Details	binding site for residue EDO A 433

Chain	Residue
A	MET204
A	GLY207
A	ALA208
A	HOH563

---

site_id	AF7
Number of Residues	5
Details	binding site for residue EDO A 434

Chain	Residue
A	LYS157
A	GLN232
A	ASP307
A	EDO414
A	HOH547

---

site_id	AF8
Number of Residues	5
Details	binding site for residue EDO A 435

Chain	Residue
A	ARG193
A	ALA196
A	GLU197
A	GLN221
A	PRO225

---

site_id	AF9
Number of Residues	6
Details	binding site for residue PEG A 436

Chain	Residue
A	ARG184
A	ASP215
A	ARG216
A	VAL217
A	HIS220
A	HOH504

---

site_id	AG1
Number of Residues	5
Details	binding site for residue PEG A 437

Chain	Residue
A	HIS54
A	TRP61
A	LYS130
A	ARG191
A	ARG296

---

site_id	AG2
Number of Residues	8
Details	binding site for residue PEG A 438

Chain	Residue
A	GLU74
A	PRO75
A	THR292
A	TYR315
A	LEU316
A	SER317
A	HOH549
A	HOH694

---

Functional Information from PROSITE/UniProt

site_id	PS00893
Number of Residues	22
Details	NUDIX_BOX Nudix box signature. GkldqgEtepvAAaREIhEEtG

Chain	Residue	Details
A	GLY66-GLY87

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	21
Details	Motif: {"description":"Nudix box","evidences":[{"source":"PROSITE-ProRule","id":"PRU00794","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	12
Details	Binding site: {"evidences":[{"source":"PubMed","id":"28375146","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28705712","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"28375146","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---