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5G3Z

Crystal structure of adenylate kinase ancestor 3 with Zn, Mg and Ap5A bound

Functional Information from GO Data
ChainGOidnamespacecontents
A0004017molecular_functionadenylate kinase activity
A0005524molecular_functionATP binding
A0006139biological_processnucleobase-containing compound metabolic process
A0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
A0019205molecular_functionnucleobase-containing compound kinase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 1216
ChainResidue
ACYS130
ACYS133
ACYS150
ACYS153

site_idAC2
Number of Residues40
DetailsBINDING SITE FOR RESIDUE AP5 A 1217
ChainResidue
AGLY14
ATHR15
ATHR31
AGLY32
AARG36
AMET53
AGLU57
AVAL59
ATHR64
AGLY85
AARG88
AGLN92
AARG123
ALEU124
AARG127
ATHR136
ATYR137
AHIS138
APHE141
AASN142
AARG160
AARG171
AGLN199
AILE201
AMG1218
AHOH2010
AHOH2016
AHOH2017
AHOH2030
AHOH2036
AHOH2042
AHOH2046
AHOH2089
AHOH2100
AHOH2111
APRO9
AGLY10
AALA11
AGLY12
ALYS13

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE MG A 1218
ChainResidue
AAP51217
AHOH2036
AHOH2064
AHOH2065
AHOH2089

Functional Information from PROSITE/UniProt
site_idPS00113
Number of Residues12
DetailsADENYLATE_KINASE Adenylate kinase signature. FLLDGFPRtvaQ
ChainResidueDetails
APHE81-GLN92

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PDB entries from 2024-07-24

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