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5G3S

The structure of the L-tryptophan oxidase VioA from Chromobacterium violaceum - Samarium derivative

Functional Information from GO Data
ChainGOidnamespacecontents
A0016491molecular_functionoxidoreductase activity
A0017000biological_processantibiotic biosynthetic process
A0046872molecular_functionmetal ion binding
B0016491molecular_functionoxidoreductase activity
B0017000biological_processantibiotic biosynthetic process
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SM A 419
ChainResidue
AGLU324
AHOH2152
AHOH2180
BARG201

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SM A 420
ChainResidue
AHIS97
ALYS101
ACL437
AHOH2181
BHOH2154

site_idAC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SM A 421
ChainResidue
AHIS361
ANO3435
ACL436
ATRS438

site_idAC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SM A 422
ChainResidue
AHIS97
AGLN100
AHOH2182
BHIS336

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SM A 423
ChainResidue
AHIS116
BHOH2188

site_idAC6
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SM A 424
ChainResidue
ALYS2
AGLN3

site_idAC7
Number of Residues1
DetailsBINDING SITE FOR RESIDUE SM A 425
ChainResidue
AHIS163

site_idAC8
Number of Residues3
DetailsBINDING SITE FOR RESIDUE HG A 426
ChainResidue
ASER15
ACYS19
ACYS387

site_idAC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE HG A 427
ChainResidue
ACYS321
AGLN332
AHG428
AHOH2149
AHOH2154
AHOH2185

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE HG A 428
ChainResidue
ACYS321
AGLY328
AHG427

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HG A 429
ChainResidue
ALEU23
ACYS29
AHG430
AHOH2011

site_idBC3
Number of Residues2
DetailsBINDING SITE FOR RESIDUE HG A 430
ChainResidue
ACYS29
AHG429

site_idBC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HG A 431
ChainResidue
APHE365
ACYS366
AALA390
ACSS395

site_idBC5
Number of Residues36
DetailsBINDING SITE FOR RESIDUE FDA A 432
ChainResidue
AVAL10
AGLY11
AGLY13
AILE14
ASER15
AASP38
AMET39
AGLN40
AGLY45
AARG46
AGLY61
AALA62
AGLY63
AARG64
ATYR206
AARG207
ALEU208
AILE241
AALA245
ALEU267
ATYR309
ATRP359
AGLY362
AASP389
AGLY396
ATRP397
AMET398
ATRS438
AHOH2005
AHOH2006
AHOH2016
AHOH2019
AHOH2027
AHOH2042
AHOH2128
AHOH2186

site_idBC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NO3 A 433
ChainResidue
AMET1
BTYR317
BHG426

site_idBC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NO3 A 434
ChainResidue
AARG48
ALYS357
ATRS438
AHOH2159
AHOH2188

site_idBC8
Number of Residues8
DetailsBINDING SITE FOR RESIDUE NO3 A 435
ChainResidue
AALA360
AHIS361
ASM421
ATRS438
AHOH2159
AHOH2188
BASP226
BGLY227

site_idBC9
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 436
ChainResidue
AHIS361
ASM421

site_idCC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL A 437
ChainResidue
ASM420

site_idCC2
Number of Residues10
DetailsBINDING SITE FOR RESIDUE TRS A 438
ChainResidue
APRO242
ASER244
AHIS361
ASM421
AFDA432
ANO3434
ANO3435
AHOH2019
AHOH2160
AHOH2186

site_idCC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SM B 419
ChainResidue
AHOH2143
BHIS97
BLYS101
BHOH2189

site_idCC4
Number of Residues4
DetailsBINDING SITE FOR RESIDUE SM B 420
ChainResidue
BHIS361
BNO3431
BCL432
BTRS433

site_idCC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE SM B 421
ChainResidue
BHIS163
BHOH2160

site_idCC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SM B 422
ChainResidue
BHIS116
BHOH2093
BHOH2192

site_idCC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE HG B 423
ChainResidue
BSER15
BCYS19
BCYS387

site_idCC8
Number of Residues1
DetailsBINDING SITE FOR RESIDUE HG B 424
ChainResidue
BHG427

site_idCC9
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HG B 425
ChainResidue
BCYS321
BGLY328
BHG426
BHOH2163

site_idDC1
Number of Residues5
DetailsBINDING SITE FOR RESIDUE HG B 426
ChainResidue
AMET1
ANO3433
BCYS321
BGLN332
BHG425

site_idDC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HG B 427
ChainResidue
BLEU23
BCYS29
BHG424
BHOH2014

site_idDC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE HG B 428
ChainResidue
BPHE365
BALA390
BCSS395
BHOH2178

site_idDC4
Number of Residues39
DetailsBINDING SITE FOR RESIDUE FDA B 429
ChainResidue
BVAL10
BGLY11
BGLY13
BILE14
BSER15
BASP38
BMET39
BGLN40
BGLY44
BGLY45
BARG46
BGLY61
BALA62
BGLY63
BARG64
BTYR206
BARG207
BLEU208
BALA240
BILE241
BALA245
BLEU267
BTYR309
BTRP359
BGLY362
BASP389
BGLY396
BTRP397
BMET398
BTRS433
BHOH2005
BHOH2006
BHOH2022
BHOH2025
BHOH2030
BHOH2040
BHOH2047
BHOH2135
BHOH2193

site_idDC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE NO3 B 430
ChainResidue
AHOH2123
BARG48
BLYS357
BNO3431
BTRS433

site_idDC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NO3 B 431
ChainResidue
AASP226
AGLY227
AHOH2123
BHIS361
BSM420
BNO3430
BTRS433

site_idDC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE CL B 432
ChainResidue
BHIS361
BSM420
BTRS433

site_idDC8
Number of Residues10
DetailsBINDING SITE FOR RESIDUE TRS B 433
ChainResidue
BPRO242
BSER244
BSM420
BFDA429
BNO3430
BNO3431
BCL432
BHOH2022
BHOH2193
BHOH2195

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues22
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"27466367","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

246905

PDB entries from 2025-12-31

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