5G2Q
The crystal structure of a S-selective transaminase from Arthrobacter sp. with alanine bound
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005829 | cellular_component | cytosol |
A | 0008483 | molecular_function | transaminase activity |
A | 0030170 | molecular_function | pyridoxal phosphate binding |
B | 0005829 | cellular_component | cytosol |
B | 0008483 | molecular_function | transaminase activity |
B | 0030170 | molecular_function | pyridoxal phosphate binding |
C | 0005829 | cellular_component | cytosol |
C | 0008483 | molecular_function | transaminase activity |
C | 0030170 | molecular_function | pyridoxal phosphate binding |
D | 0005829 | cellular_component | cytosol |
D | 0008483 | molecular_function | transaminase activity |
D | 0030170 | molecular_function | pyridoxal phosphate binding |
E | 0005829 | cellular_component | cytosol |
E | 0008483 | molecular_function | transaminase activity |
E | 0030170 | molecular_function | pyridoxal phosphate binding |
F | 0005829 | cellular_component | cytosol |
F | 0008483 | molecular_function | transaminase activity |
F | 0030170 | molecular_function | pyridoxal phosphate binding |
G | 0005829 | cellular_component | cytosol |
G | 0008483 | molecular_function | transaminase activity |
G | 0030170 | molecular_function | pyridoxal phosphate binding |
H | 0005829 | cellular_component | cytosol |
H | 0008483 | molecular_function | transaminase activity |
H | 0030170 | molecular_function | pyridoxal phosphate binding |
I | 0005829 | cellular_component | cytosol |
I | 0008483 | molecular_function | transaminase activity |
I | 0030170 | molecular_function | pyridoxal phosphate binding |
J | 0005829 | cellular_component | cytosol |
J | 0008483 | molecular_function | transaminase activity |
J | 0030170 | molecular_function | pyridoxal phosphate binding |
K | 0005829 | cellular_component | cytosol |
K | 0008483 | molecular_function | transaminase activity |
K | 0030170 | molecular_function | pyridoxal phosphate binding |
L | 0005829 | cellular_component | cytosol |
L | 0008483 | molecular_function | transaminase activity |
L | 0030170 | molecular_function | pyridoxal phosphate binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE PDA A 1000 |
Chain | Residue |
A | LEU59 |
A | VAL271 |
A | LYS298 |
A | ARG442 |
A | HOH2067 |
A | HOH2082 |
A | HOH2115 |
A | HOH2123 |
A | HOH2161 |
B | VAL328 |
B | SER329 |
A | GLY121 |
B | THR330 |
A | SER122 |
A | TYR148 |
A | HIS149 |
A | GLY150 |
A | GLU237 |
A | VAL242 |
A | ASP269 |
site_id | AC2 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE PDA B 1000 |
Chain | Residue |
A | VAL328 |
A | SER329 |
A | THR330 |
A | HOH2068 |
A | HOH2134 |
A | HOH2135 |
B | LEU59 |
B | GLY121 |
B | SER122 |
B | TYR148 |
B | HIS149 |
B | GLU237 |
B | VAL242 |
B | ASP269 |
B | VAL271 |
B | LEU272 |
B | LYS298 |
B | ARG442 |
site_id | AC3 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE PDA C 1000 |
Chain | Residue |
C | LEU59 |
C | GLY121 |
C | SER122 |
C | TYR148 |
C | HIS149 |
C | GLY150 |
C | GLU237 |
C | VAL242 |
C | ASP269 |
C | VAL271 |
C | LEU272 |
C | LYS298 |
C | ARG442 |
C | HOH2029 |
C | HOH2042 |
D | VAL328 |
D | SER329 |
D | THR330 |
site_id | AC4 |
Number of Residues | 19 |
Details | BINDING SITE FOR RESIDUE PDA D 1000 |
Chain | Residue |
C | VAL328 |
C | THR330 |
C | HOH2030 |
C | HOH2072 |
D | LEU59 |
D | THR120 |
D | GLY121 |
D | SER122 |
D | TYR148 |
D | HIS149 |
D | GLY150 |
D | GLU237 |
D | VAL242 |
D | ASP269 |
D | VAL271 |
D | LEU272 |
D | LYS298 |
D | ARG442 |
D | HOH2043 |
site_id | AC5 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE PDA E 1000 |
Chain | Residue |
E | LEU59 |
E | GLY121 |
E | SER122 |
E | TYR148 |
E | HIS149 |
E | GLU237 |
E | VAL242 |
E | ASP269 |
E | VAL271 |
E | LEU272 |
E | LYS298 |
E | ARG442 |
E | HOH2025 |
E | HOH2027 |
F | VAL328 |
F | THR330 |
site_id | AC6 |
Number of Residues | 16 |
Details | BINDING SITE FOR RESIDUE PDA F 1000 |
Chain | Residue |
F | TYR148 |
F | HIS149 |
F | GLU237 |
F | ASP269 |
F | VAL271 |
F | LEU272 |
F | LYS298 |
F | ARG442 |
E | VAL328 |
E | THR330 |
E | HOH2052 |
E | HOH2053 |
F | LEU59 |
F | THR120 |
F | GLY121 |
F | SER122 |
site_id | AC7 |
Number of Residues | 20 |
Details | BINDING SITE FOR RESIDUE PDA G 1000 |
Chain | Residue |
G | LEU59 |
G | GLY121 |
G | SER122 |
G | TYR148 |
G | HIS149 |
G | GLY150 |
G | GLU237 |
G | VAL242 |
G | ASP269 |
G | VAL271 |
G | LEU272 |
G | LYS298 |
G | ARG442 |
G | HOH2040 |
G | HOH2041 |
G | HOH2052 |
G | HOH2089 |
G | HOH2090 |
H | VAL328 |
H | THR330 |
site_id | AC8 |
Number of Residues | 17 |
Details | BINDING SITE FOR RESIDUE PDA H 1000 |
Chain | Residue |
G | VAL328 |
G | THR330 |
G | HOH2042 |
G | HOH2075 |
G | HOH2076 |
G | HOH2077 |
H | LEU59 |
H | GLY121 |
H | SER122 |
H | TYR148 |
H | HIS149 |
H | VAL242 |
H | ASP269 |
H | VAL271 |
H | LYS298 |
H | ARG442 |
H | HOH2032 |
site_id | AC9 |
Number of Residues | 18 |
Details | BINDING SITE FOR RESIDUE PDA I 1000 |
Chain | Residue |
I | LEU59 |
I | THR120 |
I | GLY121 |
I | SER122 |
I | TYR148 |
I | HIS149 |
I | GLU237 |
I | VAL242 |
I | ASP269 |
I | VAL271 |
I | LEU272 |
I | LYS298 |
I | ARG442 |
I | HOH2015 |
I | HOH2018 |
J | VAL328 |
J | SER329 |
J | THR330 |
site_id | BC1 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE PDA J 1000 |
Chain | Residue |
I | VAL328 |
I | SER329 |
I | THR330 |
J | GLY121 |
J | SER122 |
J | TYR148 |
J | HIS149 |
J | GLU237 |
J | VAL242 |
J | ASP269 |
J | VAL271 |
J | LEU272 |
J | LYS298 |
J | ARG442 |
site_id | BC2 |
Number of Residues | 14 |
Details | BINDING SITE FOR RESIDUE PDA K 1000 |
Chain | Residue |
K | THR120 |
K | GLY121 |
K | SER122 |
K | TYR148 |
K | HIS149 |
K | GLU237 |
K | VAL242 |
K | ASP269 |
K | VAL271 |
K | LEU272 |
K | LYS298 |
K | ARG442 |
L | VAL328 |
L | THR330 |
site_id | BC3 |
Number of Residues | 15 |
Details | BINDING SITE FOR RESIDUE PDA L 1000 |
Chain | Residue |
K | SER329 |
K | THR330 |
L | LEU59 |
L | THR120 |
L | GLY121 |
L | SER122 |
L | TYR148 |
L | HIS149 |
L | GLU237 |
L | VAL242 |
L | ASP269 |
L | VAL271 |
L | LEU272 |
L | LYS298 |
L | ARG442 |
Functional Information from PROSITE/UniProt
site_id | PS00599 |
Number of Residues | 10 |
Details | AA_TRANSFER_CLASS_2 Aminotransferases class-II pyridoxal-phosphate attachment site. TMGKGLSSSS |
Chain | Residue | Details |
A | THR295-SER304 |
site_id | PS00600 |
Number of Residues | 38 |
Details | AA_TRANSFER_CLASS_3 Aminotransferases class-III pyridoxal-phosphate attachment site. WIsDEVlt.GFgRtGkwfgyqhygvqp....DIItmGKglsSS |
Chain | Residue | Details |
A | TRP266-SER303 |