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5G0J

Crystal structure of Danio rerio HDAC6 CD1 and CD2 (linker intact) in complex with Nexturastat A

Functional Information from GO Data
ChainGOidnamespacecontents
A0000118cellular_componenthistone deacetylase complex
A0004407molecular_functionhistone deacetylase activity
A0006325biological_processchromatin organization
A0016575biological_processhistone deacetylation
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE CL A 1809
ChainResidue
AASP257
ACYS486

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 1810
ChainResidue
AGLN416
AGLU419
ATHR780
ALEU805

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 1811
ChainResidue
AN4R1817
AHOH2141
AASP612
AHIS614
AASP705

site_idAC4
Number of Residues8
DetailsBINDING SITE FOR RESIDUE K A 1812
ChainResidue
ALYS57
AHIS192
AASP230
AHIS232
AASP323
AGLY361
ATYR363
AHOH2060

site_idAC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K A 1813
ChainResidue
APHE623
AASP626
AVAL629
ATYR662

site_idAC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE K A 1814
ChainResidue
AASP228
AASP230
AHIS232
ASER251
AVAL252
AHIS253

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE K A 1815
ChainResidue
APHE241
AASP244
AVAL247
ATYR280

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE K A 1816
ChainResidue
AASP610
AASP612
AHIS614
ASER633
ALEU634

site_idAC9
Number of Residues15
DetailsBINDING SITE FOR RESIDUE N4R A 1817
ChainResidue
AHIS463
APRO464
ASER531
AHIS573
AHIS574
AGLY582
APHE583
AASP612
AHIS614
APHE643
AASP705
ALEU712
ATYR745
AZN1811
AHOH2141

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PDB entries from 2024-07-24

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