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5FXX

Crystal structure of JmjC domain of human histone demethylase UTY in complex with oxaloacetate

Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN A 4002
ChainResidue
ACYS1278
ACYS1281
ACYS1305
ACYS1308

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE ZN B 4002
ChainResidue
BCYS1278
BCYS1281
BCYS1305
BCYS1308

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MN B 2345
ChainResidue
BGLU1095
BHIS1173
BHOH2131
BHOH2139
BOAA2346
BHIS1093

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE MN A 2345
ChainResidue
AHIS1093
AGLU1095
AHIS1173
AHOH2129
AHOH2136
AOAA2346
AEDO2353

site_idAC5
Number of Residues10
DetailsBINDING SITE FOR RESIDUE OAA A 2346
ChainResidue
ALYS1084
ATHR1090
AHIS1093
AASN1103
AHIS1173
AVAL1175
AASN1183
AHOH2129
AHOH2136
AMN2345

site_idAC6
Number of Residues11
DetailsBINDING SITE FOR RESIDUE OAA B 2346
ChainResidue
BLYS1084
BTHR1090
BHIS1093
BASN1103
BHIS1173
BVAL1175
BASN1183
BHOH2125
BHOH2131
BHOH2139
BMN2345

site_idAC7
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 2347
ChainResidue
BILE967
BTRP968
BARG969
BHOH2285

site_idAC8
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 2347
ChainResidue
ASER932
ATHR933
AGLN986
APRO1108
AEDO2348
AEDO2352

site_idAC9
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 2348
ChainResidue
APHE990
AHOH2067
AEDO2347

site_idBC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 2349
ChainResidue
AARG1156
AHOH2003
BGLU999

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO A 2350
ChainResidue
AHIS1267
AHIS1276
ATYR1301
AVAL1303

site_idBC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE EDO A 2351
ChainResidue
AGLY919
AALA921
AGLY922
APRO1161
AGLY1162
AASP1163
AHOH2167
AHOH2283

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO B 2348
ChainResidue
ALYS895
BVAL1123
BASP1126
BPHE1127
BALA1150
BHOH2170

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 2349
ChainResidue
BPHE990
BPRO1108
BTRP1180
BHOH2076
BEDO2350

site_idBC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE EDO B 2350
ChainResidue
BSER932
BTHR933
BGLN986
BPRO1108
BASN1182
BHOH2032
BEDO2349

site_idBC7
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 2352
ChainResidue
ASER932
AILE1106
AEDO2347

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EDO B 2351
ChainResidue
BLEU1050
BTHR1051
BARG1058
BVAL1059
BVAL1060

site_idBC9
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EDO A 2353
ChainResidue
AASN1187
AHOH2129
AMN2345
AGLY1075
AGLU1095
ATRP1186

site_idCC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 2352
ChainResidue
BASP1036
BASP1039
BLYS1042
BHOH2095

site_idCC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EDO B 2353
ChainResidue
BLYS1207
BSER1210
BCYS1281
BHOH2194

site_idCC3
Number of Residues10
DetailsBINDING SITE FOR RESIDUE EDO B 2354
ChainResidue
BGLY1075
BGLN1080
BGLU1095
BSER1101
BALA1185
BTRP1186
BASN1187
BHOH2122
BHOH2131
BHOH2289

site_idCC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EDO A 2354
ChainResidue
APRO910
AASN1168
AALA1169

site_idCC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE EDO B 2355
ChainResidue
BLYS1245
BLYS1248

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues14
DetailsBINDING: BINDING => ECO:0000269|PubMed:24798337
ChainResidueDetails
ACYS1308
BHIS1093
BGLU1095
BHIS1173
BCYS1278
BCYS1281
BCYS1305
BCYS1308
AHIS1093
AGLU1095
AHIS1173
ACYS1278
ACYS1281
ACYS1305

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphothreonine => ECO:0000269|PubMed:24798337
ChainResidueDetails
ATHR887
BTHR887

221051

PDB entries from 2024-06-12

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