Chain | GOid | namespace | contents |
1 | 0003677 | molecular_function | DNA binding |
1 | 0003678 | molecular_function | DNA helicase activity |
1 | 0005524 | molecular_function | ATP binding |
1 | 0006289 | biological_process | nucleotide-excision repair |
1 | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
1 | 0016787 | molecular_function | hydrolase activity |
2 | 0003676 | molecular_function | nucleic acid binding |
2 | 0005634 | cellular_component | nucleus |
2 | 0006351 | biological_process | DNA-templated transcription |
2 | 0006368 | biological_process | transcription elongation by RNA polymerase II |
2 | 0008270 | molecular_function | zinc ion binding |
A | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
A | 0001055 | molecular_function | RNA polymerase II activity |
A | 0001172 | biological_process | RNA-templated transcription |
A | 0003677 | molecular_function | DNA binding |
A | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
A | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
A | 0005515 | molecular_function | protein binding |
A | 0005634 | cellular_component | nucleus |
A | 0005665 | cellular_component | RNA polymerase II, core complex |
A | 0005739 | cellular_component | mitochondrion |
A | 0006351 | biological_process | DNA-templated transcription |
A | 0006366 | biological_process | transcription by RNA polymerase II |
A | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
A | 0006368 | biological_process | transcription elongation by RNA polymerase II |
A | 0008270 | molecular_function | zinc ion binding |
A | 0010494 | cellular_component | cytoplasmic stress granule |
A | 0016779 | molecular_function | nucleotidyltransferase activity |
A | 0019985 | biological_process | translesion synthesis |
A | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
A | 0046872 | molecular_function | metal ion binding |
B | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
B | 0001055 | molecular_function | RNA polymerase II activity |
B | 0001172 | biological_process | RNA-templated transcription |
B | 0003677 | molecular_function | DNA binding |
B | 0003729 | molecular_function | mRNA binding |
B | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
B | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005634 | cellular_component | nucleus |
B | 0005654 | cellular_component | nucleoplasm |
B | 0005665 | cellular_component | RNA polymerase II, core complex |
B | 0005739 | cellular_component | mitochondrion |
B | 0006351 | biological_process | DNA-templated transcription |
B | 0006366 | biological_process | transcription by RNA polymerase II |
B | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
B | 0006368 | biological_process | transcription elongation by RNA polymerase II |
B | 0008270 | molecular_function | zinc ion binding |
B | 0010494 | cellular_component | cytoplasmic stress granule |
B | 0016779 | molecular_function | nucleotidyltransferase activity |
B | 0032549 | molecular_function | ribonucleoside binding |
B | 0034062 | molecular_function | 5'-3' RNA polymerase activity |
B | 0046872 | molecular_function | metal ion binding |
C | 0003677 | molecular_function | DNA binding |
C | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
C | 0006351 | biological_process | DNA-templated transcription |
C | 0046983 | molecular_function | protein dimerization activity |
D | 0000166 | molecular_function | nucleotide binding |
D | 0006352 | biological_process | DNA-templated transcription initiation |
D | 0030880 | cellular_component | RNA polymerase complex |
D | 0044237 | biological_process | cellular metabolic process |
E | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
E | 0001054 | molecular_function | RNA polymerase I activity |
E | 0001055 | molecular_function | RNA polymerase II activity |
E | 0001056 | molecular_function | RNA polymerase III activity |
E | 0001172 | biological_process | RNA-templated transcription |
E | 0003677 | molecular_function | DNA binding |
E | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
E | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
E | 0005515 | molecular_function | protein binding |
E | 0005634 | cellular_component | nucleus |
E | 0005654 | cellular_component | nucleoplasm |
E | 0005665 | cellular_component | RNA polymerase II, core complex |
E | 0005666 | cellular_component | RNA polymerase III complex |
E | 0005736 | cellular_component | RNA polymerase I complex |
E | 0006351 | biological_process | DNA-templated transcription |
E | 0006360 | biological_process | transcription by RNA polymerase I |
E | 0006361 | biological_process | transcription initiation at RNA polymerase I promoter |
E | 0006362 | biological_process | transcription elongation by RNA polymerase I |
E | 0006363 | biological_process | termination of RNA polymerase I transcription |
E | 0006366 | biological_process | transcription by RNA polymerase II |
E | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
E | 0006368 | biological_process | transcription elongation by RNA polymerase II |
E | 0006383 | biological_process | transcription by RNA polymerase III |
E | 0006384 | biological_process | transcription initiation at RNA polymerase III promoter |
E | 0006386 | biological_process | termination of RNA polymerase III transcription |
E | 0042254 | biological_process | ribosome biogenesis |
E | 0042790 | biological_process | nucleolar large rRNA transcription by RNA polymerase I |
E | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
F | 0003677 | molecular_function | DNA binding |
F | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
F | 0005634 | cellular_component | nucleus |
F | 0005665 | cellular_component | RNA polymerase II, core complex |
F | 0006351 | biological_process | DNA-templated transcription |
G | 0000288 | biological_process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay |
G | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
G | 0000932 | cellular_component | P-body |
G | 0000956 | biological_process | nuclear-transcribed mRNA catabolic process |
G | 0001172 | biological_process | RNA-templated transcription |
G | 0003676 | molecular_function | nucleic acid binding |
G | 0003697 | molecular_function | single-stranded DNA binding |
G | 0003727 | molecular_function | single-stranded RNA binding |
G | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
G | 0005515 | molecular_function | protein binding |
G | 0005634 | cellular_component | nucleus |
G | 0005665 | cellular_component | RNA polymerase II, core complex |
G | 0005737 | cellular_component | cytoplasm |
G | 0006351 | biological_process | DNA-templated transcription |
G | 0006352 | biological_process | DNA-templated transcription initiation |
G | 0006366 | biological_process | transcription by RNA polymerase II |
G | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
G | 0006368 | biological_process | transcription elongation by RNA polymerase II |
G | 0031369 | molecular_function | translation initiation factor binding |
G | 0045948 | biological_process | positive regulation of translational initiation |
G | 0055029 | cellular_component | nuclear DNA-directed RNA polymerase complex |
G | 0060213 | biological_process | positive regulation of nuclear-transcribed mRNA poly(A) tail shortening |
G | 1990328 | cellular_component | RPB4-RPB7 complex |
H | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
H | 0001054 | molecular_function | RNA polymerase I activity |
H | 0001055 | molecular_function | RNA polymerase II activity |
H | 0001056 | molecular_function | RNA polymerase III activity |
H | 0001172 | biological_process | RNA-templated transcription |
H | 0003677 | molecular_function | DNA binding |
H | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
H | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
H | 0005515 | molecular_function | protein binding |
H | 0005634 | cellular_component | nucleus |
H | 0005654 | cellular_component | nucleoplasm |
H | 0005665 | cellular_component | RNA polymerase II, core complex |
H | 0005666 | cellular_component | RNA polymerase III complex |
H | 0005736 | cellular_component | RNA polymerase I complex |
H | 0006351 | biological_process | DNA-templated transcription |
H | 0006360 | biological_process | transcription by RNA polymerase I |
H | 0006361 | biological_process | transcription initiation at RNA polymerase I promoter |
H | 0006362 | biological_process | transcription elongation by RNA polymerase I |
H | 0006363 | biological_process | termination of RNA polymerase I transcription |
H | 0006366 | biological_process | transcription by RNA polymerase II |
H | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
H | 0006368 | biological_process | transcription elongation by RNA polymerase II |
H | 0006383 | biological_process | transcription by RNA polymerase III |
H | 0006384 | biological_process | transcription initiation at RNA polymerase III promoter |
H | 0006386 | biological_process | termination of RNA polymerase III transcription |
H | 0042254 | biological_process | ribosome biogenesis |
H | 0042790 | biological_process | nucleolar large rRNA transcription by RNA polymerase I |
H | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
I | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
I | 0001172 | biological_process | RNA-templated transcription |
I | 0001193 | biological_process | maintenance of transcriptional fidelity during transcription elongation by RNA polymerase II |
I | 0003676 | molecular_function | nucleic acid binding |
I | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
I | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
I | 0005515 | molecular_function | protein binding |
I | 0005634 | cellular_component | nucleus |
I | 0005654 | cellular_component | nucleoplasm |
I | 0005665 | cellular_component | RNA polymerase II, core complex |
I | 0005730 | cellular_component | nucleolus |
I | 0006281 | biological_process | DNA repair |
I | 0006283 | biological_process | transcription-coupled nucleotide-excision repair |
I | 0006351 | biological_process | DNA-templated transcription |
I | 0006366 | biological_process | transcription by RNA polymerase II |
I | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
I | 0006368 | biological_process | transcription elongation by RNA polymerase II |
I | 0008270 | molecular_function | zinc ion binding |
I | 0046872 | molecular_function | metal ion binding |
I | 0055029 | cellular_component | nuclear DNA-directed RNA polymerase complex |
J | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
J | 0001054 | molecular_function | RNA polymerase I activity |
J | 0001055 | molecular_function | RNA polymerase II activity |
J | 0001056 | molecular_function | RNA polymerase III activity |
J | 0001172 | biological_process | RNA-templated transcription |
J | 0003677 | molecular_function | DNA binding |
J | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
J | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
J | 0005515 | molecular_function | protein binding |
J | 0005634 | cellular_component | nucleus |
J | 0005654 | cellular_component | nucleoplasm |
J | 0005665 | cellular_component | RNA polymerase II, core complex |
J | 0005666 | cellular_component | RNA polymerase III complex |
J | 0005730 | cellular_component | nucleolus |
J | 0005736 | cellular_component | RNA polymerase I complex |
J | 0006351 | biological_process | DNA-templated transcription |
J | 0006360 | biological_process | transcription by RNA polymerase I |
J | 0006361 | biological_process | transcription initiation at RNA polymerase I promoter |
J | 0006362 | biological_process | transcription elongation by RNA polymerase I |
J | 0006363 | biological_process | termination of RNA polymerase I transcription |
J | 0006366 | biological_process | transcription by RNA polymerase II |
J | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
J | 0006368 | biological_process | transcription elongation by RNA polymerase II |
J | 0006383 | biological_process | transcription by RNA polymerase III |
J | 0006384 | biological_process | transcription initiation at RNA polymerase III promoter |
J | 0006386 | biological_process | termination of RNA polymerase III transcription |
J | 0008270 | molecular_function | zinc ion binding |
J | 0042254 | biological_process | ribosome biogenesis |
J | 0042790 | biological_process | nucleolar large rRNA transcription by RNA polymerase I |
J | 0042797 | biological_process | tRNA transcription by RNA polymerase III |
J | 0046872 | molecular_function | metal ion binding |
K | 0000428 | cellular_component | DNA-directed RNA polymerase complex |
K | 0001055 | molecular_function | RNA polymerase II activity |
K | 0001172 | biological_process | RNA-templated transcription |
K | 0003677 | molecular_function | DNA binding |
K | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
K | 0003968 | molecular_function | RNA-dependent RNA polymerase activity |
K | 0005515 | molecular_function | protein binding |
K | 0005634 | cellular_component | nucleus |
K | 0005665 | cellular_component | RNA polymerase II, core complex |
K | 0006351 | biological_process | DNA-templated transcription |
K | 0006366 | biological_process | transcription by RNA polymerase II |
K | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
K | 0006368 | biological_process | transcription elongation by RNA polymerase II |
K | 0006369 | biological_process | termination of RNA polymerase II transcription |
K | 0046983 | molecular_function | protein dimerization activity |
L | 0003677 | molecular_function | DNA binding |
L | 0003899 | molecular_function | DNA-directed 5'-3' RNA polymerase activity |
L | 0006351 | biological_process | DNA-templated transcription |
L | 0008270 | molecular_function | zinc ion binding |
M | 0005672 | cellular_component | transcription factor TFIIA complex |
M | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
O | 0000979 | molecular_function | RNA polymerase II core promoter sequence-specific DNA binding |
O | 0005515 | molecular_function | protein binding |
O | 0005634 | cellular_component | nucleus |
O | 0005672 | cellular_component | transcription factor TFIIA complex |
O | 0005737 | cellular_component | cytoplasm |
O | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
O | 0016251 | molecular_function | RNA polymerase II general transcription initiation factor activity |
O | 0017025 | molecular_function | TBP-class protein binding |
O | 0045944 | biological_process | positive regulation of transcription by RNA polymerase II |
O | 0051123 | biological_process | RNA polymerase II preinitiation complex assembly |
O | 0060261 | biological_process | positive regulation of transcription initiation by RNA polymerase II |
P | 0000993 | molecular_function | RNA polymerase II complex binding |
P | 0001113 | biological_process | transcription open complex formation at RNA polymerase II promoter |
P | 0001139 | molecular_function | RNA polymerase II complex recruiting activity |
P | 0001174 | biological_process | transcriptional start site selection at RNA polymerase II promoter |
P | 0005515 | molecular_function | protein binding |
P | 0005634 | cellular_component | nucleus |
P | 0006352 | biological_process | DNA-templated transcription initiation |
P | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
P | 0008270 | molecular_function | zinc ion binding |
P | 0010467 | biological_process | gene expression |
P | 0016251 | molecular_function | RNA polymerase II general transcription initiation factor activity |
P | 0017025 | molecular_function | TBP-class protein binding |
P | 0046872 | molecular_function | metal ion binding |
P | 0051123 | biological_process | RNA polymerase II preinitiation complex assembly |
P | 0070897 | biological_process | transcription preinitiation complex assembly |
P | 0097550 | cellular_component | transcription preinitiation complex |
Q | 0003677 | molecular_function | DNA binding |
Q | 0006352 | biological_process | DNA-templated transcription initiation |
R | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
S | 0005673 | cellular_component | transcription factor TFIIE complex |
S | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
U | 0003677 | molecular_function | DNA binding |
U | 0005634 | cellular_component | nucleus |
U | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
U | 0032968 | biological_process | positive regulation of transcription elongation by RNA polymerase II |
V | 0005674 | cellular_component | transcription factor TFIIF complex |
V | 0006366 | biological_process | transcription by RNA polymerase II |
V | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
W | 0000439 | cellular_component | transcription factor TFIIH core complex |
W | 0001671 | molecular_function | ATPase activator activity |
W | 0006289 | biological_process | nucleotide-excision repair |
X | 0000439 | cellular_component | transcription factor TFIIH core complex |
X | 0006289 | biological_process | nucleotide-excision repair |
X | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
Y | 0000019 | biological_process | regulation of mitotic recombination |
Y | 0000112 | cellular_component | nucleotide-excision repair factor 3 complex |
Y | 0000439 | cellular_component | transcription factor TFIIH core complex |
Y | 0003676 | molecular_function | nucleic acid binding |
Y | 0003677 | molecular_function | DNA binding |
Y | 0003678 | molecular_function | DNA helicase activity |
Y | 0003684 | molecular_function | damaged DNA binding |
Y | 0004386 | molecular_function | helicase activity |
Y | 0005515 | molecular_function | protein binding |
Y | 0005524 | molecular_function | ATP binding |
Y | 0005634 | cellular_component | nucleus |
Y | 0005675 | cellular_component | transcription factor TFIIH holo complex |
Y | 0005829 | cellular_component | cytosol |
Y | 0006139 | biological_process | nucleobase-containing compound metabolic process |
Y | 0006281 | biological_process | DNA repair |
Y | 0006289 | biological_process | nucleotide-excision repair |
Y | 0006366 | biological_process | transcription by RNA polymerase II |
Y | 0006367 | biological_process | transcription initiation at RNA polymerase II promoter |
Y | 0006974 | biological_process | DNA damage response |
Y | 0008094 | molecular_function | ATP-dependent activity, acting on DNA |
Y | 0016787 | molecular_function | hydrolase activity |
Y | 0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
Y | 0016853 | molecular_function | isomerase activity |
Y | 0016887 | molecular_function | ATP hydrolysis activity |
Y | 0032508 | biological_process | DNA duplex unwinding |
Y | 0032991 | cellular_component | protein-containing complex |
Y | 0043139 | molecular_function | 5'-3' DNA helicase activity |
Y | 0045951 | biological_process | positive regulation of mitotic recombination |
Y | 0046872 | molecular_function | metal ion binding |
Y | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |