5F3W
Structure of the ATPrS-Mre11/Rad50-DNA complex
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0000403 | molecular_function | Y-form DNA binding |
A | 0003677 | molecular_function | DNA binding |
A | 0004519 | molecular_function | endonuclease activity |
A | 0004527 | molecular_function | exonuclease activity |
A | 0004529 | molecular_function | DNA exonuclease activity |
A | 0006281 | biological_process | DNA repair |
A | 0006302 | biological_process | double-strand break repair |
A | 0008408 | molecular_function | 3'-5' exonuclease activity |
A | 0016787 | molecular_function | hydrolase activity |
A | 0030145 | molecular_function | manganese ion binding |
A | 0042802 | molecular_function | identical protein binding |
A | 0045027 | molecular_function | DNA end binding |
A | 0046872 | molecular_function | metal ion binding |
B | 0006302 | biological_process | double-strand break repair |
B | 0016887 | molecular_function | ATP hydrolysis activity |
C | 0000403 | molecular_function | Y-form DNA binding |
C | 0003677 | molecular_function | DNA binding |
C | 0004519 | molecular_function | endonuclease activity |
C | 0004527 | molecular_function | exonuclease activity |
C | 0004529 | molecular_function | DNA exonuclease activity |
C | 0006281 | biological_process | DNA repair |
C | 0006302 | biological_process | double-strand break repair |
C | 0008408 | molecular_function | 3'-5' exonuclease activity |
C | 0016787 | molecular_function | hydrolase activity |
C | 0030145 | molecular_function | manganese ion binding |
C | 0042802 | molecular_function | identical protein binding |
C | 0045027 | molecular_function | DNA end binding |
C | 0046872 | molecular_function | metal ion binding |
D | 0006302 | biological_process | double-strand break repair |
D | 0016887 | molecular_function | ATP hydrolysis activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue MG A 401 |
Chain | Residue |
A | ASP8 |
A | HIS10 |
A | ASP49 |
A | HIS188 |
A | MG402 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue MG A 402 |
Chain | Residue |
A | MG401 |
A | ASP49 |
A | ASN84 |
A | HIS158 |
A | HIS186 |
site_id | AC3 |
Number of Residues | 22 |
Details | binding site for residue AGS B 1101 |
Chain | Residue |
B | LYS14 |
B | SER15 |
B | GLY35 |
B | SER36 |
B | GLY37 |
B | LYS38 |
B | SER39 |
B | SER40 |
B | THR60 |
B | ILE62 |
B | THR63 |
B | LYS64 |
B | GLN134 |
B | ASP946 |
B | GLU947 |
B | LYS994 |
D | TYR890 |
D | LEU910 |
D | ASN914 |
D | SER916 |
D | GLY917 |
D | GLU919 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue MG C 401 |
Chain | Residue |
C | ASP49 |
C | ASN84 |
C | HIS158 |
C | HIS186 |
C | MG402 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue MG C 402 |
Chain | Residue |
C | ASP8 |
C | HIS10 |
C | ASP49 |
C | HIS188 |
C | MG401 |
site_id | AC6 |
Number of Residues | 21 |
Details | binding site for residue AGS D 1101 |
Chain | Residue |
B | TYR890 |
B | LEU910 |
B | ASN914 |
B | SER916 |
B | GLU919 |
D | LYS14 |
D | SER15 |
D | GLU33 |
D | GLY35 |
D | SER36 |
D | GLY37 |
D | LYS38 |
D | SER39 |
D | SER40 |
D | THR60 |
D | ILE62 |
D | THR63 |
D | LYS64 |
D | GLN134 |
D | GLU947 |
D | LYS994 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00449, ECO:0007744|PDB:3AUY |
Chain | Residue | Details |
B | LYS14 | |
D | LYS14 |
site_id | SWS_FT_FI2 |
Number of Residues | 4 |
Details | BINDING: BINDING => ECO:0007744|PDB:3AUX, ECO:0007744|PDB:3AUY |
Chain | Residue | Details |
B | GLY35 | |
C | ASP49 | |
C | ASN84 | |
C | HIS158 | |
C | HIS186 | |
C | HIS188 | |
B | ILE62 | |
D | GLY35 | |
D | ILE62 | |
A | HIS158 | |
A | HIS186 | |
A | HIS188 | |
C | ASP8 | |
C | HIS10 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00449 |
Chain | Residue | Details |
B | GLN134 | |
D | GLN134 |