5F13
Structure of Mn bound DUF89 from Saccharomyces cerevisiae
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005634 | cellular_component | nucleus |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006974 | biological_process | DNA damage response |
| A | 0008150 | biological_process | biological_process |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0016791 | molecular_function | phosphatase activity |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0097023 | molecular_function | fructose 6-phosphate aldolase activity |
| A | 0103026 | molecular_function | fructose-1-phosphatase activity |
| B | 0005634 | cellular_component | nucleus |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006974 | biological_process | DNA damage response |
| B | 0008150 | biological_process | biological_process |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0016791 | molecular_function | phosphatase activity |
| B | 0046872 | molecular_function | metal ion binding |
| B | 0097023 | molecular_function | fructose 6-phosphate aldolase activity |
| B | 0103026 | molecular_function | fructose-1-phosphatase activity |
| C | 0005634 | cellular_component | nucleus |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006974 | biological_process | DNA damage response |
| C | 0008150 | biological_process | biological_process |
| C | 0016787 | molecular_function | hydrolase activity |
| C | 0016791 | molecular_function | phosphatase activity |
| C | 0046872 | molecular_function | metal ion binding |
| C | 0097023 | molecular_function | fructose 6-phosphate aldolase activity |
| C | 0103026 | molecular_function | fructose-1-phosphatase activity |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue MN A 501 |
| Chain | Residue |
| A | ASP254 |
| A | ASN255 |
| A | ASP292 |
| A | PO4502 |
| A | HOH632 |
| A | HOH636 |
| site_id | AC2 |
| Number of Residues | 9 |
| Details | binding site for residue PO4 A 502 |
| Chain | Residue |
| A | LEU385 |
| A | LYS423 |
| A | MN501 |
| A | PO4503 |
| A | HOH627 |
| A | HOH632 |
| A | ASP254 |
| A | ASN255 |
| A | ASP384 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | binding site for residue PO4 A 503 |
| Chain | Residue |
| A | GLU110 |
| A | ASP384 |
| A | LEU385 |
| A | ARG388 |
| A | PO4502 |
| A | HOH611 |
| A | HOH615 |
| A | HOH649 |
| site_id | AC4 |
| Number of Residues | 2 |
| Details | binding site for residue CL A 504 |
| Chain | Residue |
| A | HIS38 |
| A | ARG135 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue CL A 505 |
| Chain | Residue |
| A | HIS282 |
| A | GLU344 |
| A | ASP345 |
| A | TRP348 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | binding site for residue MN B 501 |
| Chain | Residue |
| B | ASP254 |
| B | ASN255 |
| B | ASP292 |
| B | PO4502 |
| B | HOH608 |
| B | HOH628 |
| site_id | AC7 |
| Number of Residues | 9 |
| Details | binding site for residue PO4 B 502 |
| Chain | Residue |
| B | ASP254 |
| B | ASN255 |
| B | ASP384 |
| B | LEU385 |
| B | MN501 |
| B | PO4503 |
| B | HOH603 |
| B | HOH608 |
| B | HOH628 |
| site_id | AC8 |
| Number of Residues | 6 |
| Details | binding site for residue PO4 B 503 |
| Chain | Residue |
| B | GLU110 |
| B | ASP384 |
| B | LEU385 |
| B | ARG388 |
| B | PO4502 |
| B | HOH601 |
| site_id | AC9 |
| Number of Residues | 1 |
| Details | binding site for residue CL B 504 |
| Chain | Residue |
| B | HIS38 |
| site_id | AD1 |
| Number of Residues | 6 |
| Details | binding site for residue EDO B 505 |
| Chain | Residue |
| B | ARG248 |
| B | ARG343 |
| B | ASP372 |
| C | ARG248 |
| C | ARG343 |
| C | ASP372 |
| site_id | AD2 |
| Number of Residues | 6 |
| Details | binding site for residue MN C 501 |
| Chain | Residue |
| C | ASP254 |
| C | ASN255 |
| C | ASP292 |
| C | PO4502 |
| C | HOH608 |
| C | HOH609 |
| site_id | AD3 |
| Number of Residues | 9 |
| Details | binding site for residue PO4 C 502 |
| Chain | Residue |
| C | ASP254 |
| C | ASN255 |
| C | ASP384 |
| C | LEU385 |
| C | LYS423 |
| C | MN501 |
| C | PO4503 |
| C | HOH608 |
| C | HOH609 |
| site_id | AD4 |
| Number of Residues | 5 |
| Details | binding site for residue PO4 C 503 |
| Chain | Residue |
| C | GLU110 |
| C | ASP384 |
| C | LEU385 |
| C | ARG388 |
| C | PO4502 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 9 |
| Details | Motif: {"description":"Subfamily III RTxK motif","evidences":[{"source":"PubMed","id":"27322068","evidenceCode":"ECO:0000305"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"27322068","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3PT1","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 9 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"27322068","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3PT1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5BY0","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
