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5F0X

Crystal structure of human GRP78 (70kDa heat shock protein 5 / BIP) ATPase domain in complex with 2'-deoxy-ADP and inorganic phosphate

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0140662molecular_functionATP-dependent protein folding chaperone
B0005524molecular_functionATP binding
B0140662molecular_functionATP-dependent protein folding chaperone
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 501
ChainResidue
APO4502
AHOH605
AHOH615
AHOH662
AHOH665

site_idAC2
Number of Residues10
Detailsbinding site for residue PO4 A 502
ChainResidue
ATHR229
AMG501
AHOH605
AHOH615
AHOH626
AHOH816
AGLY36
ATHR37
ALYS96
AGLU201

site_idAC3
Number of Residues13
Detailsbinding site for residue DTP A 503
ChainResidue
AARG60
AARG297
ASER300
AGLY364
ASER365
AARG367
AASN389
AHOH610
AHOH617
AHOH650
AHOH700
AHOH749
AHOH814

site_idAC4
Number of Residues6
Detailsbinding site for residue MG B 501
ChainResidue
BPO4502
BDAT504
BHOH614
BHOH621
BHOH627
BHOH651

site_idAC5
Number of Residues13
Detailsbinding site for residue PO4 B 502
ChainResidue
BGLY36
BTHR37
BLYS96
BPRO173
BGLU201
BTHR229
BMG501
BDAT504
BHOH601
BHOH614
BHOH621
BHOH627
BHOH747

site_idAC6
Number of Residues15
Detailsbinding site for residue DTP B 503
ChainResidue
ALYS271
AARG279
BGLU158
BGLY162
BLYS163
BLYS164
BHIS265
BLYS268
BLEU269
BLYS271
BARG279
BHOH608
BHOH617
BHOH694
BHOH753

site_idAC7
Number of Residues27
Detailsbinding site for residue DAT B 504
ChainResidue
BTHR37
BTHR38
BTYR39
BGLY226
BGLY227
BGLY255
BLYS296
BARG297
BSER300
BGLY363
BGLY364
BSER365
BARG367
BASP391
BMG501
BPO4502
BHOH601
BHOH603
BHOH621
BHOH625
BHOH627
BHOH651
BHOH685
BHOH732
BHOH749
BHOH811
BHOH864

Functional Information from PROSITE/UniProt
site_idPS00297
Number of Residues8
DetailsHSP70_1 Heat shock hsp70 proteins family signature 1. IDLGTTyS
ChainResidueDetails
AILE33-SER40

site_idPS00329
Number of Residues14
DetailsHSP70_2 Heat shock hsp70 proteins family signature 2. VFDLGGGTfdvSLL
ChainResidueDetails
AVAL222-LEU235

site_idPS01036
Number of Residues15
DetailsHSP70_3 Heat shock hsp70 proteins family signature 3. IvLvGGsTRIPkIqQ
ChainResidueDetails
AILE359-GLN373

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:21526763
ChainResidueDetails
AGLY36
BGLY364
ALYS96
AGLY227
AGLU293
AGLY364
BGLY36
BLYS96
BGLY227
BGLU293

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: Phosphoserine => ECO:0000250|UniProtKB:P06761
ChainResidueDetails
ASER86
BSER86

site_idSWS_FT_FI3
Number of Residues6
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ALYS125
ALYS213
ALYS326
BLYS125
BLYS213
BLYS326

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: 3'-nitrotyrosine => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ATYR160
BTYR160

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P0DMV8
ChainResidueDetails
ALYS271
BLYS271

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0000250|UniProtKB:P20029
ChainResidueDetails
ALYS353
BLYS353

site_idSWS_FT_FI7
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25114211, ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS352
BLYS352

site_idSWS_FT_FI8
Number of Residues4
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate => ECO:0007744|PubMed:25114211
ChainResidueDetails
ALYS353
BLYS353

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PDB entries from 2024-07-31

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