5F0K
Structure of VPS35 N terminal region
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0015031 | biological_process | protein transport |
| A | 0030906 | cellular_component | retromer, cargo-selective complex |
| A | 0042147 | biological_process | retrograde transport, endosome to Golgi |
| B | 0015031 | biological_process | protein transport |
| B | 0030906 | cellular_component | retromer, cargo-selective complex |
| B | 0042147 | biological_process | retrograde transport, endosome to Golgi |
| C | 0015031 | biological_process | protein transport |
| C | 0030906 | cellular_component | retromer, cargo-selective complex |
| C | 0042147 | biological_process | retrograde transport, endosome to Golgi |
| D | 0015031 | biological_process | protein transport |
| D | 0030906 | cellular_component | retromer, cargo-selective complex |
| D | 0042147 | biological_process | retrograde transport, endosome to Golgi |
| E | 0015031 | biological_process | protein transport |
| E | 0030906 | cellular_component | retromer, cargo-selective complex |
| E | 0042147 | biological_process | retrograde transport, endosome to Golgi |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 501 |
| Chain | Residue |
| A | LEU43 |
| A | LEU97 |
| A | VAL98 |
| site_id | AC2 |
| Number of Residues | 2 |
| Details | binding site for residue EDO A 502 |
| Chain | Residue |
| D | ASN280 |
| D | PRO281 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 503 |
| Chain | Residue |
| A | GLN141 |
| A | HIS142 |
| A | ARG145 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 504 |
| Chain | Residue |
| A | ASN103 |
| A | ILE104 |
| A | ARG54 |
| site_id | AC5 |
| Number of Residues | 3 |
| Details | binding site for residue EDO A 505 |
| Chain | Residue |
| A | GLN291 |
| A | ASN292 |
| A | ASP341 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue GOL A 506 |
| Chain | Residue |
| A | LYS31 |
| A | TYR76 |
| B | PHE28 |
| site_id | AC7 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 A 507 |
| Chain | Residue |
| A | ASN37 |
| A | LEU39 |
| A | MET40 |
| A | LYS90 |
| E | LYS90 |
| E | SO4505 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 501 |
| Chain | Residue |
| A | GLU231 |
| B | ARG54 |
| B | ASN103 |
| B | ILE104 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | binding site for residue EDO B 502 |
| Chain | Residue |
| B | GLN141 |
| B | HIS142 |
| site_id | AD1 |
| Number of Residues | 2 |
| Details | binding site for residue GOL B 503 |
| Chain | Residue |
| B | LEU97 |
| B | ALA101 |
| site_id | AD2 |
| Number of Residues | 1 |
| Details | binding site for residue GOL B 504 |
| Chain | Residue |
| B | TYR118 |
| site_id | AD3 |
| Number of Residues | 2 |
| Details | binding site for residue GOL B 505 |
| Chain | Residue |
| B | LYS31 |
| E | PHE28 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 B 506 |
| Chain | Residue |
| B | LEU39 |
| B | MET40 |
| B | LYS90 |
| site_id | AD5 |
| Number of Residues | 4 |
| Details | binding site for residue EDO C 501 |
| Chain | Residue |
| C | VAL140 |
| C | GLN141 |
| C | HIS142 |
| C | ARG145 |
| site_id | AD6 |
| Number of Residues | 1 |
| Details | binding site for residue EDO C 502 |
| Chain | Residue |
| C | LYS31 |
| site_id | AD7 |
| Number of Residues | 4 |
| Details | binding site for residue GOL C 503 |
| Chain | Residue |
| C | ASN37 |
| C | LEU39 |
| C | MET40 |
| C | LYS90 |
| site_id | AD8 |
| Number of Residues | 2 |
| Details | binding site for residue PG4 C 504 |
| Chain | Residue |
| C | ASN280 |
| C | ARG284 |
| site_id | AD9 |
| Number of Residues | 3 |
| Details | binding site for residue EDO D 501 |
| Chain | Residue |
| D | ARG54 |
| D | ASN103 |
| D | ILE104 |
| site_id | AE1 |
| Number of Residues | 2 |
| Details | binding site for residue EDO D 502 |
| Chain | Residue |
| C | ARG158 |
| D | GLY51 |
| site_id | AE2 |
| Number of Residues | 3 |
| Details | binding site for residue EDO D 503 |
| Chain | Residue |
| A | ARG284 |
| D | GLN330 |
| D | LYS371 |
| site_id | AE3 |
| Number of Residues | 4 |
| Details | binding site for residue GOL D 504 |
| Chain | Residue |
| A | VAL25 |
| A | PHE28 |
| D | LYS31 |
| D | TYR76 |
| site_id | AE4 |
| Number of Residues | 5 |
| Details | binding site for residue GOL D 505 |
| Chain | Residue |
| A | GLY51 |
| D | ARG158 |
| D | ASN159 |
| D | ARG226 |
| D | GLN229 |
| site_id | AE5 |
| Number of Residues | 3 |
| Details | binding site for residue EDO E 501 |
| Chain | Residue |
| B | ASN280 |
| B | ARG284 |
| E | GLY174 |
| site_id | AE6 |
| Number of Residues | 4 |
| Details | binding site for residue EDO E 502 |
| Chain | Residue |
| E | GLN141 |
| E | HIS142 |
| E | ARG145 |
| E | GOL503 |
| site_id | AE7 |
| Number of Residues | 5 |
| Details | binding site for residue GOL E 503 |
| Chain | Residue |
| E | ARG54 |
| E | ASN103 |
| E | ILE104 |
| E | ILE105 |
| E | EDO502 |
| site_id | AE8 |
| Number of Residues | 2 |
| Details | binding site for residue GOL E 504 |
| Chain | Residue |
| C | VAL25 |
| E | LYS31 |
| site_id | AE9 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 E 505 |
| Chain | Residue |
| A | LYS90 |
| A | SO4507 |
| E | LYS38 |
| E | LEU39 |
| E | MET40 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 125 |
| Details | Region: {"description":"Interaction with SNX3","evidences":[{"source":"PubMed","id":"24344282","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
