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5EKX

DENGUE 3 NS5 METHYLTRANSFERASE BOUND TO S-ADENOSYLMETHIONINE AND FRAGMENT NB2E11

Functional Information from GO Data
ChainGOidnamespacecontents
A0004482molecular_functionmRNA 5'-cap (guanine-N7-)-methyltransferase activity
A0004483molecular_functionmethyltransferase cap1 activity
A0008168molecular_functionmethyltransferase activity
A0032259biological_processmethylation
B0004482molecular_functionmRNA 5'-cap (guanine-N7-)-methyltransferase activity
B0004483molecular_functionmethyltransferase cap1 activity
B0008168molecular_functionmethyltransferase activity
B0032259biological_processmethylation
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue SAM A 301
ChainResidue
ASER56
AHIS110
ALYS130
AASP131
AVAL132
APHE133
AASP146
AHOH404
AHOH415
AHOH437
AHOH447
AGLY58
AGLY81
ACYS82
AGLY83
AGLY86
ATRP87
ATHR104
ALYS105

site_idAC2
Number of Residues5
Detailsbinding site for residue 2CQ A 302
ChainResidue
AGLY107
APRO108
AHIS110
AGLU112
AVAL234

site_idAC3
Number of Residues19
Detailsbinding site for residue SAM B 4000
ChainResidue
BSER56
BGLY58
BGLY81
BCYS82
BGLY86
BTRP87
BTHR104
BLYS105
BHIS110
BLYS130
BASP131
BVAL132
BPHE133
BASP146
BILE147
BHOH4106
BHOH4116
BHOH4120
BHOH4139

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsMotif: {"description":"SUMO-interacting motif","evidences":[{"source":"UniProtKB","id":"P29990","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues8
DetailsActive site: {"description":"For 2'-O-MTase activity","evidences":[{"source":"UniProtKB","id":"Q6YMS4","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues18
DetailsBinding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues14
DetailsSite: {"description":"mRNA cap binding","evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsSite: {"description":"mRNA cap binding; via carbonyl oxygen","evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues6
DetailsSite: {"description":"Essential for 2'-O-methyltransferase activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues2
DetailsSite: {"description":"Essential for 2'-O-methyltransferase and N-7 methyltransferase activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU00924","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues2
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P03314","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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