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5EKS

Structure of 3-dehydroquinate synthase from Acinetobacter baumannii in complex with NAD

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0003856molecular_function3-dehydroquinate synthase activity
A0005737cellular_componentcytoplasm
A0008652biological_processamino acid biosynthetic process
A0009073biological_processaromatic amino acid family biosynthetic process
A0009423biological_processchorismate biosynthetic process
A0016829molecular_functionlyase activity
A0016838molecular_functioncarbon-oxygen lyase activity, acting on phosphates
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0003856molecular_function3-dehydroquinate synthase activity
B0005737cellular_componentcytoplasm
B0008652biological_processamino acid biosynthetic process
B0009073biological_processaromatic amino acid family biosynthetic process
B0009423biological_processchorismate biosynthetic process
B0016829molecular_functionlyase activity
B0016838molecular_functioncarbon-oxygen lyase activity, acting on phosphates
B0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues34
Detailsbinding site for residue NAD A 400
ChainResidue
AASN41
AVAL105
AASP108
ATHR128
ATHR129
ALEU131
AASP135
ASER136
ALYS141
AASN151
AGLN168
ATHR43
ATHR171
ALEU172
AGLU176
AHOH508
AHOH518
AHOH530
AHOH536
AHOH545
AHOH556
AHOH591
AVAL44
AHOH600
AHOH656
AHOH662
AHOH666
AHOH676
ATYR48
AASP70
AGLU72
ALYS75
AGLY103
AGLY104

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 401
ChainResidue
AGLU183
AHIS246
AHIS263
AHOH610
AHOH631

site_idAC3
Number of Residues33
Detailsbinding site for residue NAD B 400
ChainResidue
BASN41
BTHR43
BVAL44
BTYR48
BASP70
BGLU72
BLYS75
BGLY103
BGLY104
BVAL105
BASP108
BTHR128
BTHR129
BLEU131
BASP135
BLYS141
BASN151
BGLN168
BTHR171
BLEU172
BGLU176
BHOH527
BHOH536
BHOH549
BHOH562
BHOH573
BHOH583
BHOH595
BHOH597
BHOH598
BHOH687
BHOH690
BHOH751

site_idAC4
Number of Residues6
Detailsbinding site for residue MG B 401
ChainResidue
BGLU183
BHIS246
BHIS263
BHOH520
BHOH648
BHOH788

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PDB entries from 2024-07-17

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