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5EEN

Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with belinostat

Functional Information from GO Data
ChainGOidnamespacecontents
A0000118cellular_componenthistone deacetylase complex
A0004407molecular_functionhistone deacetylase activity
A0006325biological_processchromatin organization
A0016575biological_processhistone deacetylation
B0000118cellular_componenthistone deacetylase complex
B0004407molecular_functionhistone deacetylase activity
B0006325biological_processchromatin organization
B0016575biological_processhistone deacetylation
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue K B 801
ChainResidue
BASP610
BASP612
BHIS614
BSER633
BLEU634

site_idAC2
Number of Residues6
Detailsbinding site for residue K B 802
ChainResidue
BHOH907
BHOH974
BPHE623
BASP626
BVAL629
BTYR662

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN B 803
ChainResidue
BASP612
BHIS614
BASP705
B5OG804

site_idAC4
Number of Residues14
Detailsbinding site for residue 5OG B 804
ChainResidue
ALYS658
BPRO464
BSER531
BHIS573
BHIS574
BPHE583
BASP612
BHIS614
BPHE643
BASP705
BLEU712
BTYR745
BZN803
BHOH977

site_idAC5
Number of Residues5
Detailsbinding site for residue K A 801
ChainResidue
AASP610
AASP612
AHIS614
ASER633
ALEU634

site_idAC6
Number of Residues6
Detailsbinding site for residue K A 802
ChainResidue
APHE623
AASP626
AVAL629
ATYR662
AHOH962
AHOH993

site_idAC7
Number of Residues4
Detailsbinding site for residue ZN A 803
ChainResidue
AASP612
AHIS614
AASP705
A5OG804

site_idAC8
Number of Residues14
Detailsbinding site for residue 5OG A 804
ChainResidue
AHIS463
APRO464
ASER531
AHIS573
AHIS574
APHE583
AASP612
AHIS614
APHE643
AASP705
ATYR745
AZN803
AHOH963
BLYS658

site_idAC9
Number of Residues1
Detailsbinding site for residue CL A 805
ChainResidue
AARG736

site_idAD1
Number of Residues1
Detailsbinding site for residue CL A 806
ChainResidue
BARG736

223790

PDB entries from 2024-08-14

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