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5EEM

Crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2

Functional Information from GO Data
ChainGOidnamespacecontents
A0000118cellular_componenthistone deacetylase complex
A0004407molecular_functionhistone deacetylase activity
A0006325biological_processchromatin organization
A0016575biological_processhistone deacetylation
B0000118cellular_componenthistone deacetylase complex
B0004407molecular_functionhistone deacetylase activity
B0006325biological_processchromatin organization
B0016575biological_processhistone deacetylation
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN B 801
ChainResidue
BASP612
BHIS614
BASP705
BFMT805

site_idAC2
Number of Residues6
Detailsbinding site for residue K B 802
ChainResidue
BHOH999
BPHE623
BASP626
BVAL629
BTYR662
BHOH943

site_idAC3
Number of Residues5
Detailsbinding site for residue K B 803
ChainResidue
BASP610
BASP612
BHIS614
BSER633
BLEU634

site_idAC4
Number of Residues3
Detailsbinding site for residue NA B 804
ChainResidue
BTYR662
BPHE793
BTRP794

site_idAC5
Number of Residues7
Detailsbinding site for residue FMT B 805
ChainResidue
BHIS573
BHIS574
BASP612
BHIS614
BASP705
BTYR745
BZN801

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN A 801
ChainResidue
AASP612
AHIS614
AASP705
AHOH926

site_idAC7
Number of Residues5
Detailsbinding site for residue K A 802
ChainResidue
AASP610
AASP612
AHIS614
ASER633
ALEU634

site_idAC8
Number of Residues6
Detailsbinding site for residue K A 803
ChainResidue
APHE623
AASP626
AVAL629
ATYR662
AHOH931
AHOH992

221051

PDB entries from 2024-06-12

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