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5DYI

Structure of p97 N-D1 wild-type in complex with ADP

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0016887molecular_functionATP hydrolysis activity
B0005524molecular_functionATP binding
B0016887molecular_functionATP hydrolysis activity
C0005524molecular_functionATP binding
C0016887molecular_functionATP hydrolysis activity
D0005524molecular_functionATP binding
D0016887molecular_functionATP hydrolysis activity
E0005524molecular_functionATP binding
E0016887molecular_functionATP hydrolysis activity
F0005524molecular_functionATP binding
F0016887molecular_functionATP hydrolysis activity
G0005524molecular_functionATP binding
G0016887molecular_functionATP hydrolysis activity
H0005524molecular_functionATP binding
H0016887molecular_functionATP hydrolysis activity
I0005524molecular_functionATP binding
I0016887molecular_functionATP hydrolysis activity
J0005524molecular_functionATP binding
J0016887molecular_functionATP hydrolysis activity
K0005524molecular_functionATP binding
K0016887molecular_functionATP hydrolysis activity
L0005524molecular_functionATP binding
L0016887molecular_functionATP hydrolysis activity
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue ADP A 800
ChainResidue
AASP205
AASP304
AILE380
AHIS384
AGLY408
AALA409
BARG359
AILE206
AGLY207
AGLY248
ATHR249
AGLY250
ALYS251
ATHR252
ALEU253

site_idAC2
Number of Residues15
Detailsbinding site for residue ADP B 800
ChainResidue
BASP205
BGLY207
BPRO247
BGLY248
BTHR249
BGLY250
BLYS251
BTHR252
BLEU253
BASP304
BILE380
BHIS384
BGLY408
BALA409
CARG359

site_idAC3
Number of Residues14
Detailsbinding site for residue ADP C 800
ChainResidue
CASP205
CGLY207
CGLY248
CTHR249
CGLY250
CLYS251
CTHR252
CLEU253
CASP304
CILE380
CHIS384
CGLY408
CALA409
DARG359

site_idAC4
Number of Residues14
Detailsbinding site for residue ADP D 800
ChainResidue
DASP205
DGLY207
DGLY248
DTHR249
DGLY250
DLYS251
DTHR252
DLEU253
DASP304
DILE380
DHIS384
DGLY408
DALA409
EARG359

site_idAC5
Number of Residues14
Detailsbinding site for residue ADP E 800
ChainResidue
EASP205
EGLY207
EGLY248
ETHR249
EGLY250
ELYS251
ETHR252
ELEU253
EASP304
EILE380
EHIS384
EGLY408
EALA409
FARG359

site_idAC6
Number of Residues14
Detailsbinding site for residue ADP F 800
ChainResidue
AARG359
FASP205
FGLY207
FGLY248
FTHR249
FGLY250
FLYS251
FTHR252
FLEU253
FASP304
FILE380
FHIS384
FGLY408
FALA409

site_idAC7
Number of Residues14
Detailsbinding site for residue ADP G 800
ChainResidue
HARG359
GASP205
GGLY207
GGLY248
GTHR249
GGLY250
GLYS251
GTHR252
GLEU253
GASP304
GILE380
GHIS384
GGLY408
GALA409

site_idAC8
Number of Residues14
Detailsbinding site for residue ADP H 800
ChainResidue
HASP205
HGLY207
HPRO247
HGLY248
HTHR249
HGLY250
HLYS251
HTHR252
HLEU253
HILE380
HHIS384
HGLY408
HALA409
IARG359

site_idAC9
Number of Residues14
Detailsbinding site for residue ADP I 800
ChainResidue
IASP205
IGLY207
IGLY248
ITHR249
IGLY250
ILYS251
ITHR252
ILEU253
IASP304
IILE380
IHIS384
IGLY408
IALA409
JARG359

site_idAD1
Number of Residues15
Detailsbinding site for residue ADP J 800
ChainResidue
JASP205
JGLY207
JPRO247
JGLY248
JTHR249
JGLY250
JLYS251
JTHR252
JLEU253
JASP304
JILE380
JHIS384
JGLY408
JALA409
KARG359

site_idAD2
Number of Residues14
Detailsbinding site for residue ADP K 800
ChainResidue
KASP205
KGLY207
KGLY248
KTHR249
KGLY250
KLYS251
KTHR252
KLEU253
KASP304
KILE380
KHIS384
KGLY408
KALA409
LARG359

site_idAD3
Number of Residues14
Detailsbinding site for residue ADP L 800
ChainResidue
GARG359
LASP205
LGLY207
LGLY248
LTHR249
LGLY250
LLYS251
LTHR252
LLEU253
LASP304
LILE380
LHIS384
LGLY408
LALA409

Functional Information from PROSITE/UniProt
site_idPS00674
Number of Residues19
DetailsAAA AAA-protein family signature. ViVMaATNrpnsIDpALr.R
ChainResidueDetails
AVAL341-ARG359

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues96
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"20512113","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues12
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"19369195","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues12
DetailsModified residue: {"description":"N6,N6,N6-trimethyllysine; by VCPKMT","evidences":[{"source":"PubMed","id":"22948820","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"23349634","evidenceCode":"ECO:0000269"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues12
DetailsModified residue: {"description":"Phosphothreonine","evidences":[{"source":"PubMed","id":"18691976","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

248335

PDB entries from 2026-01-28

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