5DV5
The fatty acid-responsive FadR repressor of Vibrio alginolyticus complex with Palmitoyl-CoA
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000062 | molecular_function | fatty-acyl-CoA binding |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003700 | molecular_function | DNA-binding transcription factor activity |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0019217 | biological_process | regulation of fatty acid metabolic process |
| B | 0000062 | molecular_function | fatty-acyl-CoA binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003700 | molecular_function | DNA-binding transcription factor activity |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0019217 | biological_process | regulation of fatty acid metabolic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 22 |
| Details | binding site for residue PKZ A 301 |
| Chain | Residue |
| A | LEU101 |
| A | GLY256 |
| A | MET257 |
| A | SER259 |
| A | ALA260 |
| A | HOH407 |
| A | HOH409 |
| A | HOH413 |
| A | HOH423 |
| B | ARG114 |
| B | TYR115 |
| A | LEU102 |
| B | LYS118 |
| B | SER196 |
| B | ARG245 |
| A | ALA103 |
| A | ARG105 |
| A | THR106 |
| A | TYR212 |
| A | TYR219 |
| A | PHE220 |
| A | ARG253 |
| site_id | AC2 |
| Number of Residues | 18 |
| Details | binding site for residue PKZ A 302 |
| Chain | Residue |
| A | ILE82 |
| A | ARG126 |
| A | ASN130 |
| A | SER134 |
| A | TYR153 |
| A | LYS156 |
| A | TYR184 |
| A | ARG191 |
| A | PHE194 |
| A | GLN199 |
| A | LEU203 |
| A | ASN206 |
| A | HOH417 |
| B | ILE20 |
| B | TRP21 |
| B | PHE74 |
| B | ILE82 |
| B | PKZ302 |
| site_id | AC3 |
| Number of Residues | 20 |
| Details | binding site for residue PKZ B 301 |
| Chain | Residue |
| A | ARG114 |
| A | TYR115 |
| A | LYS118 |
| A | ARG245 |
| B | LEU102 |
| B | ALA103 |
| B | ARG105 |
| B | THR106 |
| B | ASN182 |
| B | LEU208 |
| B | TYR212 |
| B | VAL215 |
| B | TYR219 |
| B | PHE220 |
| B | ARG253 |
| B | GLY256 |
| B | SER259 |
| B | HOH404 |
| B | HOH418 |
| B | HOH422 |
| site_id | AC4 |
| Number of Residues | 20 |
| Details | binding site for residue PKZ B 302 |
| Chain | Residue |
| A | ILE20 |
| A | TRP21 |
| A | PRO27 |
| A | PHE74 |
| A | ILE82 |
| A | LEU86 |
| A | PKZ302 |
| B | LEU83 |
| B | ARG126 |
| B | ASN130 |
| B | SER134 |
| B | TYR153 |
| B | LYS156 |
| B | TYR184 |
| B | ARG191 |
| B | PHE194 |
| B | ILE200 |
| B | LEU203 |
| B | HOH405 |
| B | HOH410 |
