5DST
Crystal structure of human PRMT8 in complex with SAH
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| A | 0018216 | biological_process | peptidyl-arginine methylation |
| B | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| B | 0018216 | biological_process | peptidyl-arginine methylation |
| C | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| C | 0018216 | biological_process | peptidyl-arginine methylation |
| D | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| D | 0018216 | biological_process | peptidyl-arginine methylation |
| E | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| E | 0018216 | biological_process | peptidyl-arginine methylation |
| F | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| F | 0018216 | biological_process | peptidyl-arginine methylation |
| G | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| G | 0018216 | biological_process | peptidyl-arginine methylation |
| H | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| H | 0018216 | biological_process | peptidyl-arginine methylation |
| I | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| I | 0018216 | biological_process | peptidyl-arginine methylation |
| J | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| J | 0018216 | biological_process | peptidyl-arginine methylation |
| K | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| K | 0018216 | biological_process | peptidyl-arginine methylation |
| L | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| L | 0018216 | biological_process | peptidyl-arginine methylation |
| M | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| M | 0018216 | biological_process | peptidyl-arginine methylation |
| N | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| N | 0018216 | biological_process | peptidyl-arginine methylation |
| O | 0016274 | molecular_function | protein-arginine N-methyltransferase activity |
| O | 0018216 | biological_process | peptidyl-arginine methylation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 18 |
| Details | binding site for residue SAH A 401 |
| Chain | Residue |
| A | TYR80 |
| A | GLU141 |
| A | CYS142 |
| A | GLY167 |
| A | LYS168 |
| A | VAL169 |
| A | GLU170 |
| A | GLU185 |
| A | MET196 |
| A | THR199 |
| A | HIS86 |
| A | MET89 |
| A | ARG95 |
| A | GLY119 |
| A | SER120 |
| A | THR122 |
| A | ILE124 |
| A | LEU125 |
| site_id | AC2 |
| Number of Residues | 15 |
| Details | binding site for residue SAH B 401 |
| Chain | Residue |
| B | TYR80 |
| B | HIS86 |
| B | MET89 |
| B | ARG95 |
| B | GLY119 |
| B | SER120 |
| B | ILE124 |
| B | LEU125 |
| B | GLU141 |
| B | CYS142 |
| B | VAL169 |
| B | GLU170 |
| B | GLU185 |
| B | MET196 |
| B | THR199 |
| site_id | AC3 |
| Number of Residues | 17 |
| Details | binding site for residue SAH C 401 |
| Chain | Residue |
| C | TYR80 |
| C | HIS86 |
| C | MET89 |
| C | ARG95 |
| C | GLY119 |
| C | SER120 |
| C | THR122 |
| C | ILE124 |
| C | LEU125 |
| C | GLU141 |
| C | CYS142 |
| C | GLY167 |
| C | LYS168 |
| C | VAL169 |
| C | GLU170 |
| C | MET196 |
| C | THR199 |
| site_id | AC4 |
| Number of Residues | 18 |
| Details | binding site for residue SAH D 401 |
| Chain | Residue |
| D | TYR80 |
| D | HIS86 |
| D | MET89 |
| D | ARG95 |
| D | GLY119 |
| D | SER120 |
| D | THR122 |
| D | ILE124 |
| D | LEU125 |
| D | GLU141 |
| D | CYS142 |
| D | SER143 |
| D | GLY167 |
| D | LYS168 |
| D | VAL169 |
| D | GLU170 |
| D | MET196 |
| D | THR199 |
| site_id | AC5 |
| Number of Residues | 15 |
| Details | binding site for residue SAH E 401 |
| Chain | Residue |
| E | TYR80 |
| E | HIS86 |
| E | MET89 |
| E | ARG95 |
| E | GLY119 |
| E | SER120 |
| E | THR122 |
| E | ILE124 |
| E | LEU125 |
| E | GLU141 |
| E | CYS142 |
| E | VAL169 |
| E | GLU170 |
| E | MET196 |
| E | THR199 |
| site_id | AC6 |
| Number of Residues | 17 |
| Details | binding site for residue SAH F 401 |
| Chain | Residue |
| F | THR199 |
| F | TYR80 |
| F | HIS86 |
| F | MET89 |
| F | ARG95 |
| F | GLY119 |
| F | SER120 |
| F | THR122 |
| F | ILE124 |
| F | LEU125 |
| F | GLU141 |
| F | CYS142 |
| F | GLY167 |
| F | VAL169 |
| F | GLU170 |
| F | GLU185 |
| F | MET196 |
| site_id | AC7 |
| Number of Residues | 17 |
| Details | binding site for residue SAH G 401 |
| Chain | Residue |
| G | TYR80 |
| G | HIS86 |
| G | ARG95 |
| G | GLY119 |
| G | SER120 |
| G | THR122 |
| G | ILE124 |
| G | LEU125 |
| G | GLU141 |
| G | CYS142 |
| G | GLY167 |
| G | LYS168 |
| G | VAL169 |
| G | GLU170 |
| G | GLU185 |
| G | MET196 |
| G | THR199 |
| site_id | AC8 |
| Number of Residues | 16 |
| Details | binding site for residue SAH H 401 |
| Chain | Residue |
| H | TYR80 |
| H | MET89 |
| H | ARG95 |
| H | GLY119 |
| H | SER120 |
| H | THR122 |
| H | ILE124 |
| H | LEU125 |
| H | GLU141 |
| H | CYS142 |
| H | GLY167 |
| H | LYS168 |
| H | VAL169 |
| H | GLU170 |
| H | MET196 |
| H | THR199 |
| site_id | AC9 |
| Number of Residues | 17 |
| Details | binding site for residue SAH I 401 |
| Chain | Residue |
| I | TYR80 |
| I | MET89 |
| I | ARG95 |
| I | GLY119 |
| I | SER120 |
| I | GLY121 |
| I | THR122 |
| I | ILE124 |
| I | LEU125 |
| I | GLU141 |
| I | CYS142 |
| I | GLY167 |
| I | LYS168 |
| I | VAL169 |
| I | GLU170 |
| I | MET196 |
| I | THR199 |
| site_id | AD1 |
| Number of Residues | 16 |
| Details | binding site for residue SAH J 401 |
| Chain | Residue |
| J | TYR80 |
| J | MET89 |
| J | ARG95 |
| J | GLY119 |
| J | SER120 |
| J | THR122 |
| J | ILE124 |
| J | LEU125 |
| J | GLU141 |
| J | CYS142 |
| J | GLY167 |
| J | LYS168 |
| J | VAL169 |
| J | GLU170 |
| J | MET196 |
| J | THR199 |
| site_id | AD2 |
| Number of Residues | 16 |
| Details | binding site for residue SAH K 401 |
| Chain | Residue |
| K | TYR80 |
| K | HIS86 |
| K | ARG95 |
| K | GLY119 |
| K | SER120 |
| K | THR122 |
| K | ILE124 |
| K | LEU125 |
| K | GLU141 |
| K | CYS142 |
| K | GLY167 |
| K | LYS168 |
| K | VAL169 |
| K | GLU170 |
| K | MET196 |
| K | THR199 |
| site_id | AD3 |
| Number of Residues | 17 |
| Details | binding site for residue SAH L 401 |
| Chain | Residue |
| L | TYR80 |
| L | HIS86 |
| L | MET89 |
| L | ARG95 |
| L | GLY119 |
| L | SER120 |
| L | THR122 |
| L | ILE124 |
| L | LEU125 |
| L | GLU141 |
| L | CYS142 |
| L | GLY167 |
| L | VAL169 |
| L | GLU170 |
| L | GLU185 |
| L | MET196 |
| L | THR199 |
| site_id | AD4 |
| Number of Residues | 17 |
| Details | binding site for residue SAH M 401 |
| Chain | Residue |
| M | TYR80 |
| M | HIS86 |
| M | MET89 |
| M | ARG95 |
| M | GLY119 |
| M | SER120 |
| M | THR122 |
| M | ILE124 |
| M | LEU125 |
| M | GLU141 |
| M | CYS142 |
| M | SER143 |
| M | VAL169 |
| M | GLU170 |
| M | GLU185 |
| M | MET196 |
| M | THR199 |
| site_id | AD5 |
| Number of Residues | 14 |
| Details | binding site for residue SAH N 401 |
| Chain | Residue |
| N | TYR80 |
| N | HIS86 |
| N | ARG95 |
| N | GLY119 |
| N | SER120 |
| N | THR122 |
| N | LEU125 |
| N | GLU141 |
| N | CYS142 |
| N | GLY167 |
| N | VAL169 |
| N | GLU170 |
| N | MET196 |
| N | THR199 |
| site_id | AD6 |
| Number of Residues | 19 |
| Details | binding site for residue SAH O 401 |
| Chain | Residue |
| O | TYR80 |
| O | HIS86 |
| O | MET89 |
| O | ARG95 |
| O | GLY119 |
| O | SER120 |
| O | GLY121 |
| O | THR122 |
| O | ILE124 |
| O | LEU125 |
| O | GLU141 |
| O | CYS142 |
| O | GLY167 |
| O | LYS168 |
| O | VAL169 |
| O | GLU170 |
| O | GLU185 |
| O | MET196 |
| O | THR199 |
Functional Information from PROSITE/UniProt
| site_id | PS00329 |
| Number of Residues | 14 |
| Details | HSP70_2 Heat shock hsp70 proteins family signature 2. VLDVGSGTgilSMF |
| Chain | Residue | Details |
| A | VAL115-PHE128 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 30 |
| Details | Active site: {"evidences":[{"source":"UniProtKB","id":"Q63009","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 15 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q63009","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 75 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"26529540","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"26876602","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"4X41","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5DST","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 30 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"26876602","evidenceCode":"ECO:0000305"},{"source":"PDB","id":"5DST","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |






