5DNA
Crystal structure of Candida boidinii formate dehydrogenase
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| A | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| A | 0042183 | biological_process | formate catabolic process |
| A | 0051287 | molecular_function | NAD binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| B | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| B | 0042183 | biological_process | formate catabolic process |
| B | 0051287 | molecular_function | NAD binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| C | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| C | 0042183 | biological_process | formate catabolic process |
| C | 0051287 | molecular_function | NAD binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005829 | cellular_component | cytosol |
| D | 0008863 | molecular_function | formate dehydrogenase (NAD+) activity |
| D | 0016616 | molecular_function | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
| D | 0042183 | biological_process | formate catabolic process |
| D | 0051287 | molecular_function | NAD binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 A 401 |
| Chain | Residue |
| A | GLN197 |
| A | ALA198 |
| A | ARG211 |
| A | HOH514 |
| A | HOH524 |
| A | HOH613 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 402 |
| Chain | Residue |
| A | HOH518 |
| A | HOH744 |
| A | GLY173 |
| A | ARG174 |
| A | HOH506 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 B 401 |
| Chain | Residue |
| B | GLY173 |
| B | ARG174 |
| B | HOH547 |
| B | HOH730 |
| B | HOH774 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue SO4 D 401 |
| Chain | Residue |
| D | GLY173 |
| D | ARG174 |
| D | HOH502 |
| D | HOH509 |
| D | HOH572 |
| D | HOH728 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 D 402 |
| Chain | Residue |
| D | GLN197 |
| D | ALA198 |
| D | ARG211 |
| D | HOH503 |
| D | HOH632 |
Functional Information from PROSITE/UniProt
| site_id | PS00065 |
| Number of Residues | 29 |
| Details | D_2_HYDROXYACID_DH_1 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. IATIGaGRIGyrvlerlvpfnpkeLLyYD |
| Chain | Residue | Details |
| A | ILE167-ASP195 |
| site_id | PS00670 |
| Number of Residues | 23 |
| Details | D_2_HYDROXYACID_DH_2 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. LVaqADIVtINaPlhagTkgLiN |
| Chain | Residue | Details |
| A | LEU218-ASN240 |
| site_id | PS00671 |
| Number of Residues | 17 |
| Details | D_2_HYDROXYACID_DH_3 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. FKkGaWLVNtARGaICV |
| Chain | Residue | Details |
| A | PHE247-VAL263 |
