5DJQ
The structure of CBB3 cytochrome oxidase.
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0004129 | molecular_function | cytochrome-c oxidase activity |
A | 0005506 | molecular_function | iron ion binding |
A | 0005507 | molecular_function | copper ion binding |
A | 0005886 | cellular_component | plasma membrane |
A | 0006119 | biological_process | oxidative phosphorylation |
A | 0008121 | molecular_function | ubiquinol-cytochrome-c reductase activity |
A | 0009060 | biological_process | aerobic respiration |
A | 0015078 | molecular_function | proton transmembrane transporter activity |
A | 0015990 | biological_process | electron transport coupled proton transport |
A | 0016020 | cellular_component | membrane |
A | 0016705 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
A | 0019411 | biological_process | aerobic respiration, using ferrous ions as electron donor |
A | 0019646 | biological_process | aerobic electron transport chain |
A | 0019825 | molecular_function | oxygen binding |
A | 0020037 | molecular_function | heme binding |
A | 0022904 | biological_process | respiratory electron transport chain |
A | 0046872 | molecular_function | metal ion binding |
A | 0070069 | cellular_component | cytochrome complex |
A | 0098803 | cellular_component | respiratory chain complex |
A | 1902600 | biological_process | proton transmembrane transport |
B | 0009055 | molecular_function | electron transfer activity |
B | 0016020 | cellular_component | membrane |
B | 0020037 | molecular_function | heme binding |
B | 0046872 | molecular_function | metal ion binding |
B | 0070069 | cellular_component | cytochrome complex |
C | 0005886 | cellular_component | plasma membrane |
C | 0006119 | biological_process | oxidative phosphorylation |
C | 0009055 | molecular_function | electron transfer activity |
C | 0016491 | molecular_function | oxidoreductase activity |
C | 0020037 | molecular_function | heme binding |
C | 0046872 | molecular_function | metal ion binding |
C | 0070069 | cellular_component | cytochrome complex |
C | 1902600 | biological_process | proton transmembrane transport |
D | 0004129 | molecular_function | cytochrome-c oxidase activity |
D | 0005506 | molecular_function | iron ion binding |
D | 0005507 | molecular_function | copper ion binding |
D | 0005886 | cellular_component | plasma membrane |
D | 0006119 | biological_process | oxidative phosphorylation |
D | 0008121 | molecular_function | ubiquinol-cytochrome-c reductase activity |
D | 0009060 | biological_process | aerobic respiration |
D | 0015078 | molecular_function | proton transmembrane transporter activity |
D | 0015990 | biological_process | electron transport coupled proton transport |
D | 0016020 | cellular_component | membrane |
D | 0016705 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
D | 0019411 | biological_process | aerobic respiration, using ferrous ions as electron donor |
D | 0019646 | biological_process | aerobic electron transport chain |
D | 0019825 | molecular_function | oxygen binding |
D | 0020037 | molecular_function | heme binding |
D | 0022904 | biological_process | respiratory electron transport chain |
D | 0046872 | molecular_function | metal ion binding |
D | 0070069 | cellular_component | cytochrome complex |
D | 0098803 | cellular_component | respiratory chain complex |
D | 1902600 | biological_process | proton transmembrane transport |
E | 0009055 | molecular_function | electron transfer activity |
E | 0016020 | cellular_component | membrane |
E | 0020037 | molecular_function | heme binding |
E | 0046872 | molecular_function | metal ion binding |
E | 0070069 | cellular_component | cytochrome complex |
F | 0005886 | cellular_component | plasma membrane |
F | 0006119 | biological_process | oxidative phosphorylation |
F | 0009055 | molecular_function | electron transfer activity |
F | 0016491 | molecular_function | oxidoreductase activity |
F | 0020037 | molecular_function | heme binding |
F | 0046872 | molecular_function | metal ion binding |
F | 0070069 | cellular_component | cytochrome complex |
F | 1902600 | biological_process | proton transmembrane transport |
G | 0004129 | molecular_function | cytochrome-c oxidase activity |
G | 0005506 | molecular_function | iron ion binding |
G | 0005507 | molecular_function | copper ion binding |
G | 0005886 | cellular_component | plasma membrane |
G | 0006119 | biological_process | oxidative phosphorylation |
G | 0008121 | molecular_function | ubiquinol-cytochrome-c reductase activity |
G | 0009060 | biological_process | aerobic respiration |
G | 0015078 | molecular_function | proton transmembrane transporter activity |
G | 0015990 | biological_process | electron transport coupled proton transport |
G | 0016020 | cellular_component | membrane |
G | 0016705 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
G | 0019411 | biological_process | aerobic respiration, using ferrous ions as electron donor |
G | 0019646 | biological_process | aerobic electron transport chain |
G | 0019825 | molecular_function | oxygen binding |
G | 0020037 | molecular_function | heme binding |
G | 0022904 | biological_process | respiratory electron transport chain |
G | 0046872 | molecular_function | metal ion binding |
G | 0070069 | cellular_component | cytochrome complex |
G | 0098803 | cellular_component | respiratory chain complex |
G | 1902600 | biological_process | proton transmembrane transport |
H | 0009055 | molecular_function | electron transfer activity |
H | 0016020 | cellular_component | membrane |
H | 0020037 | molecular_function | heme binding |
H | 0046872 | molecular_function | metal ion binding |
H | 0070069 | cellular_component | cytochrome complex |
I | 0005886 | cellular_component | plasma membrane |
I | 0006119 | biological_process | oxidative phosphorylation |
I | 0009055 | molecular_function | electron transfer activity |
I | 0016491 | molecular_function | oxidoreductase activity |
I | 0020037 | molecular_function | heme binding |
I | 0046872 | molecular_function | metal ion binding |
I | 0070069 | cellular_component | cytochrome complex |
I | 1902600 | biological_process | proton transmembrane transport |
K | 0004129 | molecular_function | cytochrome-c oxidase activity |
K | 0005506 | molecular_function | iron ion binding |
K | 0005507 | molecular_function | copper ion binding |
K | 0005886 | cellular_component | plasma membrane |
K | 0006119 | biological_process | oxidative phosphorylation |
K | 0008121 | molecular_function | ubiquinol-cytochrome-c reductase activity |
K | 0009060 | biological_process | aerobic respiration |
K | 0015078 | molecular_function | proton transmembrane transporter activity |
K | 0015990 | biological_process | electron transport coupled proton transport |
K | 0016020 | cellular_component | membrane |
K | 0016705 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
K | 0019411 | biological_process | aerobic respiration, using ferrous ions as electron donor |
K | 0019646 | biological_process | aerobic electron transport chain |
K | 0019825 | molecular_function | oxygen binding |
K | 0020037 | molecular_function | heme binding |
K | 0022904 | biological_process | respiratory electron transport chain |
K | 0046872 | molecular_function | metal ion binding |
K | 0070069 | cellular_component | cytochrome complex |
K | 0098803 | cellular_component | respiratory chain complex |
K | 1902600 | biological_process | proton transmembrane transport |
L | 0009055 | molecular_function | electron transfer activity |
L | 0016020 | cellular_component | membrane |
L | 0020037 | molecular_function | heme binding |
L | 0046872 | molecular_function | metal ion binding |
L | 0070069 | cellular_component | cytochrome complex |
M | 0005886 | cellular_component | plasma membrane |
M | 0006119 | biological_process | oxidative phosphorylation |
M | 0009055 | molecular_function | electron transfer activity |
M | 0016491 | molecular_function | oxidoreductase activity |
M | 0020037 | molecular_function | heme binding |
M | 0046872 | molecular_function | metal ion binding |
M | 0070069 | cellular_component | cytochrome complex |
M | 1902600 | biological_process | proton transmembrane transport |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 22 |
Details | binding site for residue HEM A 501 |
Chain | Residue |
A | GLU122 |
A | GLY324 |
A | PRO325 |
A | MET327 |
A | ALA328 |
A | ASN333 |
A | HIS337 |
A | HIS345 |
A | VAL346 |
A | GLY349 |
A | HEM502 |
A | TYR123 |
A | PEO505 |
A | CA507 |
B | SER102 |
A | TRP203 |
A | VAL210 |
A | TYR251 |
A | HIS257 |
A | HIS258 |
A | LEU279 |
A | SER283 |
site_id | AC2 |
Number of Residues | 23 |
Details | binding site for residue HEM A 502 |
Chain | Residue |
A | MET29 |
A | GLY32 |
A | VAL33 |
A | ALA36 |
A | ARG57 |
A | HIS60 |
A | VAL64 |
A | ILE65 |
A | GLU122 |
A | TYR123 |
A | ASP340 |
A | ILE343 |
A | VAL346 |
A | HIS347 |
A | ALA350 |
A | LEU351 |
A | TYR395 |
A | ARG437 |
A | GLY441 |
A | PHE444 |
A | HEM501 |
A | CA507 |
B | LYS103 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue CU A 503 |
Chain | Residue |
A | HIS207 |
A | HIS257 |
A | HIS258 |
A | PEO505 |
site_id | AC4 |
Number of Residues | 4 |
Details | binding site for residue CA A 504 |
Chain | Residue |
A | ALA124 |
A | LEU126 |
A | ASP131 |
A | ASN179 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue PEO A 505 |
Chain | Residue |
A | HIS207 |
A | VAL210 |
A | HIS258 |
A | HEM501 |
A | CU503 |
site_id | AC6 |
Number of Residues | 5 |
Details | binding site for residue PO4 A 506 |
Chain | Residue |
A | MET273 |
A | ILE329 |
A | LYS330 |
A | THR331 |
C | TYR72 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue CA A 507 |
Chain | Residue |
A | ARG57 |
A | GLU122 |
A | HEM501 |
A | HEM502 |
B | SER102 |
site_id | AC8 |
Number of Residues | 21 |
Details | binding site for residue HEC B 301 |
Chain | Residue |
A | PHE53 |
A | LEU427 |
B | GLU63 |
B | CYS65 |
B | CYS68 |
B | HIS69 |
B | THR105 |
B | GLY106 |
B | PRO107 |
B | LEU109 |
B | TYR116 |
B | HIS121 |
B | HIS124 |
B | LEU125 |
B | VAL132 |
B | SER135 |
B | LYS136 |
B | MET137 |
B | PRO138 |
B | TYR140 |
B | MET188 |
site_id | AC9 |
Number of Residues | 22 |
Details | binding site for residue HEC C 401 |
Chain | Residue |
C | LEU247 |
C | GLY248 |
C | PRO250 |
C | TRP258 |
C | ILE259 |
C | TYR260 |
C | LEU267 |
C | THR270 |
C | ILE271 |
C | GLY277 |
C | HEC402 |
I | ILE183 |
C | ARG166 |
C | ALA184 |
C | ALA185 |
C | MET186 |
C | PRO187 |
C | TRP189 |
C | THR232 |
C | CYS233 |
C | CYS236 |
C | HIS237 |
site_id | AD1 |
Number of Residues | 22 |
Details | binding site for residue HEC C 402 |
Chain | Residue |
B | TYR116 |
C | TYR142 |
C | CYS143 |
C | CYS146 |
C | HIS147 |
C | GLY156 |
C | PHE157 |
C | PRO158 |
C | LEU160 |
C | TRP165 |
C | ARG166 |
C | TRP167 |
C | ILE174 |
C | SER177 |
C | ILE178 |
C | ALA184 |
C | GLY277 |
C | GLN278 |
C | MET279 |
C | PRO280 |
C | GLN282 |
C | HEC401 |
site_id | AD2 |
Number of Residues | 8 |
Details | binding site for residue FC6 C 403 |
Chain | Residue |
C | GLY265 |
C | GLN266 |
C | GLN269 |
C | ARG275 |
M | ARG206 |
M | PRO215 |
M | SER263 |
M | LEU264 |
site_id | AD3 |
Number of Residues | 22 |
Details | binding site for residue HEM D 501 |
Chain | Residue |
D | GLU122 |
D | TYR123 |
D | TRP203 |
D | VAL210 |
D | TYR251 |
D | HIS257 |
D | HIS258 |
D | LEU279 |
D | SER283 |
D | SER320 |
D | GLY324 |
D | PRO325 |
D | MET327 |
D | ALA328 |
D | ASN333 |
D | HIS337 |
D | HIS345 |
D | VAL346 |
D | HEM502 |
D | PEO506 |
D | CA507 |
E | SER102 |
site_id | AD4 |
Number of Residues | 23 |
Details | binding site for residue HEM D 502 |
Chain | Residue |
D | MET29 |
D | GLY32 |
D | VAL33 |
D | ALA36 |
D | ARG57 |
D | HIS60 |
D | VAL64 |
D | ILE65 |
D | GLU122 |
D | TYR123 |
D | ASP340 |
D | ILE343 |
D | VAL346 |
D | HIS347 |
D | ALA350 |
D | LEU351 |
D | TYR395 |
D | ARG437 |
D | GLY441 |
D | PHE444 |
D | HEM501 |
D | CA507 |
E | LYS103 |
site_id | AD5 |
Number of Residues | 4 |
Details | binding site for residue CU D 503 |
Chain | Residue |
D | HIS207 |
D | HIS257 |
D | HIS258 |
D | PEO506 |
site_id | AD6 |
Number of Residues | 5 |
Details | binding site for residue CA D 504 |
Chain | Residue |
D | SER119 |
D | ALA124 |
D | LEU126 |
D | ASP131 |
D | ASN179 |
site_id | AD7 |
Number of Residues | 5 |
Details | binding site for residue PO4 D 505 |
Chain | Residue |
D | MET273 |
D | ILE329 |
D | LYS330 |
D | THR331 |
F | TYR72 |
site_id | AD8 |
Number of Residues | 5 |
Details | binding site for residue PEO D 506 |
Chain | Residue |
D | HIS207 |
D | VAL210 |
D | HIS258 |
D | HEM501 |
D | CU503 |
site_id | AD9 |
Number of Residues | 5 |
Details | binding site for residue CA D 507 |
Chain | Residue |
D | ARG57 |
D | GLU122 |
D | HEM501 |
D | HEM502 |
E | SER102 |
site_id | AE1 |
Number of Residues | 9 |
Details | binding site for residue FC6 F 403 |
Chain | Residue |
F | TYR260 |
F | GLY265 |
F | GLN266 |
F | GLN269 |
F | ARG275 |
I | ARG206 |
I | PRO215 |
I | SER263 |
I | LEU264 |
site_id | AE2 |
Number of Residues | 22 |
Details | binding site for residue HEM G 501 |
Chain | Residue |
G | GLU122 |
G | TYR123 |
G | TRP203 |
G | VAL210 |
G | TYR251 |
G | HIS257 |
G | HIS258 |
G | LEU279 |
G | SER283 |
G | SER320 |
G | GLY324 |
G | PRO325 |
G | MET327 |
G | ALA328 |
G | ASN333 |
G | HIS337 |
G | HIS345 |
G | VAL346 |
G | HEM502 |
G | PEO505 |
G | CA507 |
H | SER102 |
site_id | AE3 |
Number of Residues | 25 |
Details | binding site for residue HEM G 502 |
Chain | Residue |
G | MET29 |
G | GLY32 |
G | VAL33 |
G | ILE35 |
G | ALA36 |
G | ARG57 |
G | HIS60 |
G | VAL64 |
G | ILE65 |
G | GLU122 |
G | TYR123 |
G | ASP340 |
G | THR342 |
G | ILE343 |
G | VAL346 |
G | HIS347 |
G | ALA350 |
G | LEU351 |
G | TYR395 |
G | ARG437 |
G | GLY441 |
G | PHE444 |
G | HEM501 |
G | CA507 |
H | LYS103 |
site_id | AE4 |
Number of Residues | 4 |
Details | binding site for residue CU G 503 |
Chain | Residue |
G | HIS207 |
G | HIS257 |
G | HIS258 |
G | PEO505 |
site_id | AE5 |
Number of Residues | 5 |
Details | binding site for residue CA G 504 |
Chain | Residue |
G | SER119 |
G | ALA124 |
G | LEU126 |
G | ASP131 |
G | ASN179 |
site_id | AE6 |
Number of Residues | 5 |
Details | binding site for residue PEO G 505 |
Chain | Residue |
G | HIS207 |
G | VAL210 |
G | HIS258 |
G | HEM501 |
G | CU503 |
site_id | AE7 |
Number of Residues | 5 |
Details | binding site for residue PO4 G 506 |
Chain | Residue |
G | MET273 |
G | ILE329 |
G | LYS330 |
G | THR331 |
I | TYR72 |
site_id | AE8 |
Number of Residues | 5 |
Details | binding site for residue CA G 507 |
Chain | Residue |
G | ARG57 |
G | GLU122 |
G | HEM501 |
G | HEM502 |
H | SER102 |
site_id | AE9 |
Number of Residues | 8 |
Details | binding site for residue FC6 I 401 |
Chain | Residue |
F | ARG206 |
F | PRO215 |
F | SER263 |
F | LEU264 |
I | GLY265 |
I | GLN266 |
I | GLN269 |
I | ARG275 |
site_id | AF1 |
Number of Residues | 24 |
Details | binding site for residue HEM K 501 |
Chain | Residue |
K | GLU122 |
K | TYR123 |
K | TRP203 |
K | VAL210 |
K | LEU214 |
K | HIS257 |
K | LEU279 |
K | SER283 |
K | SER320 |
K | GLY324 |
K | PRO325 |
K | MET327 |
K | ALA328 |
K | ASN333 |
K | HIS337 |
K | THR342 |
K | HIS345 |
K | VAL346 |
K | GLY349 |
K | HEM502 |
K | CU503 |
K | CA504 |
K | PEO507 |
L | SER102 |
site_id | AF2 |
Number of Residues | 26 |
Details | binding site for residue HEM K 502 |
Chain | Residue |
K | MET29 |
K | GLY32 |
K | VAL33 |
K | ILE35 |
K | ALA36 |
K | LEU39 |
K | ARG57 |
K | HIS60 |
K | THR61 |
K | VAL64 |
K | ILE65 |
K | GLU122 |
K | TYR123 |
K | ASP340 |
K | ILE343 |
K | VAL346 |
K | HIS347 |
K | ALA350 |
K | LEU351 |
K | TYR395 |
K | ARG437 |
K | GLY441 |
K | PHE444 |
K | HEM501 |
K | CA504 |
L | LYS103 |
site_id | AF3 |
Number of Residues | 5 |
Details | binding site for residue CU K 503 |
Chain | Residue |
K | HIS207 |
K | HIS257 |
K | HIS258 |
K | HEM501 |
K | PEO507 |
site_id | AF4 |
Number of Residues | 5 |
Details | binding site for residue CA K 504 |
Chain | Residue |
K | ARG57 |
K | GLU122 |
K | HEM501 |
K | HEM502 |
L | SER102 |
site_id | AF5 |
Number of Residues | 4 |
Details | binding site for residue CA K 505 |
Chain | Residue |
K | ALA124 |
K | LEU126 |
K | ASP131 |
K | ASN179 |
site_id | AF6 |
Number of Residues | 5 |
Details | binding site for residue PO4 K 506 |
Chain | Residue |
K | MET273 |
K | ILE329 |
K | LYS330 |
K | THR331 |
M | TYR72 |
site_id | AF7 |
Number of Residues | 5 |
Details | binding site for residue PEO K 507 |
Chain | Residue |
K | HIS207 |
K | VAL210 |
K | HIS258 |
K | HEM501 |
K | CU503 |
site_id | AF8 |
Number of Residues | 8 |
Details | binding site for residue FC6 M 401 |
Chain | Residue |
C | ARG206 |
C | PRO215 |
C | SER263 |
C | LEU264 |
M | GLY265 |
M | GLN266 |
M | GLN269 |
M | ARG275 |
site_id | AF9 |
Number of Residues | 25 |
Details | binding site for Di-peptide HEC E 301 and CYS E 65 |
Chain | Residue |
D | PHE53 |
D | LEU427 |
E | TYR60 |
E | GLU63 |
E | GLY64 |
E | VAL66 |
E | GLY67 |
E | CYS68 |
E | HIS69 |
E | THR105 |
E | GLY106 |
E | PRO107 |
E | LEU109 |
E | TYR116 |
E | TRP120 |
E | HIS121 |
E | HIS124 |
E | LEU125 |
E | VAL132 |
E | SER135 |
E | MET137 |
E | PRO138 |
E | TYR140 |
E | MET188 |
F | ILE145 |
site_id | AG1 |
Number of Residues | 25 |
Details | binding site for Di-peptide HEC E 301 and CYS E 68 |
Chain | Residue |
D | PHE53 |
D | LEU427 |
E | GLU63 |
E | CYS65 |
E | VAL66 |
E | GLY67 |
E | HIS69 |
E | LYS103 |
E | ARG104 |
E | THR105 |
E | GLY106 |
E | PRO107 |
E | LEU109 |
E | TYR116 |
E | TRP120 |
E | HIS121 |
E | HIS124 |
E | LEU125 |
E | VAL132 |
E | SER135 |
E | MET137 |
E | PRO138 |
E | TYR140 |
E | MET188 |
F | ILE145 |
site_id | AG2 |
Number of Residues | 24 |
Details | binding site for Di-peptide HEC F 401 and CYS F 233 |
Chain | Residue |
F | ARG166 |
F | ALA184 |
F | ALA185 |
F | MET186 |
F | PRO187 |
F | TRP189 |
F | TYR229 |
F | THR232 |
F | ALA234 |
F | VAL235 |
F | CYS236 |
F | HIS237 |
F | LEU247 |
F | GLY248 |
F | ALA249 |
F | PRO250 |
F | TRP258 |
F | ILE259 |
F | TYR260 |
F | LEU267 |
F | THR270 |
F | ILE271 |
F | GLY277 |
F | HEC402 |
site_id | AG3 |
Number of Residues | 25 |
Details | binding site for Di-peptide HEC F 401 and CYS F 236 |
Chain | Residue |
F | ARG166 |
F | ALA184 |
F | ALA185 |
F | MET186 |
F | PRO187 |
F | TRP189 |
F | THR232 |
F | CYS233 |
F | ALA234 |
F | VAL235 |
F | HIS237 |
F | GLY238 |
F | MET244 |
F | LEU247 |
F | GLY248 |
F | ALA249 |
F | PRO250 |
F | TRP258 |
F | ILE259 |
F | TYR260 |
F | LEU267 |
F | THR270 |
F | ILE271 |
F | GLY277 |
F | HEC402 |
site_id | AG4 |
Number of Residues | 23 |
Details | binding site for Di-peptide HEC F 402 and CYS F 143 |
Chain | Residue |
E | TYR116 |
E | SER117 |
F | PHE139 |
F | TYR142 |
F | SER144 |
F | ILE145 |
F | CYS146 |
F | HIS147 |
F | GLY156 |
F | PRO158 |
F | LEU160 |
F | TRP165 |
F | ARG166 |
F | TRP167 |
F | SER177 |
F | ILE178 |
F | ALA184 |
F | GLY277 |
F | GLN278 |
F | MET279 |
F | PRO280 |
F | GLN282 |
F | HEC401 |
site_id | AG5 |
Number of Residues | 23 |
Details | binding site for Di-peptide HEC F 402 and CYS F 146 |
Chain | Residue |
E | TYR116 |
E | SER117 |
F | CYS143 |
F | SER144 |
F | ILE145 |
F | HIS147 |
F | GLY148 |
F | GLY156 |
F | PHE157 |
F | PRO158 |
F | LEU160 |
F | TRP165 |
F | ARG166 |
F | TRP167 |
F | SER177 |
F | ILE178 |
F | ALA184 |
F | GLY277 |
F | GLN278 |
F | MET279 |
F | PRO280 |
F | GLN282 |
F | HEC401 |
site_id | AG6 |
Number of Residues | 26 |
Details | binding site for Di-peptide HEC H 301 and CYS H 68 |
Chain | Residue |
G | PHE53 |
G | LEU427 |
H | GLU63 |
H | CYS65 |
H | VAL66 |
H | GLY67 |
H | HIS69 |
H | LYS103 |
H | ARG104 |
H | THR105 |
H | GLY106 |
H | PRO107 |
H | LEU109 |
H | TYR116 |
H | TRP120 |
H | HIS121 |
H | HIS124 |
H | LEU125 |
H | VAL132 |
H | SER135 |
H | LYS136 |
H | MET137 |
H | PRO138 |
H | TYR140 |
H | MET188 |
I | ILE145 |
site_id | AG7 |
Number of Residues | 26 |
Details | binding site for Di-peptide HEC H 301 and CYS H 65 |
Chain | Residue |
G | PHE53 |
G | LEU427 |
H | TYR60 |
H | GLU63 |
H | GLY64 |
H | VAL66 |
H | GLY67 |
H | CYS68 |
H | HIS69 |
H | THR105 |
H | GLY106 |
H | PRO107 |
H | LEU109 |
H | TYR116 |
H | TRP120 |
H | HIS121 |
H | HIS124 |
H | LEU125 |
H | VAL132 |
H | SER135 |
H | LYS136 |
H | MET137 |
H | PRO138 |
H | TYR140 |
H | MET188 |
I | ILE145 |
site_id | AG8 |
Number of Residues | 26 |
Details | binding site for Di-peptide HEC I 402 and CYS I 233 |
Chain | Residue |
C | ILE183 |
I | ARG166 |
I | ALA184 |
I | ALA185 |
I | MET186 |
I | PRO187 |
I | TRP189 |
I | TYR229 |
I | THR232 |
I | ALA234 |
I | VAL235 |
I | CYS236 |
I | HIS237 |
I | LEU247 |
I | GLY248 |
I | PRO250 |
I | LEU252 |
I | TRP258 |
I | ILE259 |
I | TYR260 |
I | GLY261 |
I | LEU267 |
I | THR270 |
I | ILE271 |
I | GLY277 |
I | HEC403 |
site_id | AG9 |
Number of Residues | 28 |
Details | binding site for Di-peptide HEC I 402 and CYS I 236 |
Chain | Residue |
C | ILE183 |
I | ARG166 |
I | ALA184 |
I | ALA185 |
I | MET186 |
I | PRO187 |
I | TRP189 |
I | THR232 |
I | CYS233 |
I | ALA234 |
I | VAL235 |
I | HIS237 |
I | GLY238 |
I | MET244 |
I | LEU247 |
I | GLY248 |
I | ALA249 |
I | PRO250 |
I | LEU252 |
I | TRP258 |
I | ILE259 |
I | TYR260 |
I | GLY261 |
I | LEU267 |
I | THR270 |
I | ILE271 |
I | GLY277 |
I | HEC403 |
site_id | AH1 |
Number of Residues | 24 |
Details | binding site for Di-peptide HEC I 403 and CYS I 146 |
Chain | Residue |
H | TYR116 |
H | TRP120 |
I | TYR142 |
I | CYS143 |
I | SER144 |
I | ILE145 |
I | HIS147 |
I | GLY148 |
I | GLY156 |
I | PHE157 |
I | PRO158 |
I | TRP165 |
I | ARG166 |
I | TRP167 |
I | ILE174 |
I | SER177 |
I | ILE178 |
I | ALA184 |
I | GLY277 |
I | GLN278 |
I | MET279 |
I | PRO280 |
I | GLN282 |
I | HEC402 |
site_id | AH2 |
Number of Residues | 22 |
Details | binding site for Di-peptide HEC I 403 and CYS I 143 |
Chain | Residue |
H | TYR116 |
I | PHE139 |
I | TYR142 |
I | SER144 |
I | ILE145 |
I | CYS146 |
I | HIS147 |
I | GLY156 |
I | PRO158 |
I | TRP165 |
I | ARG166 |
I | TRP167 |
I | ILE174 |
I | SER177 |
I | ILE178 |
I | ALA184 |
I | GLY277 |
I | GLN278 |
I | MET279 |
I | PRO280 |
I | GLN282 |
I | HEC402 |
site_id | AH3 |
Number of Residues | 22 |
Details | binding site for Di-peptide HEC L 301 and CYS L 68 |
Chain | Residue |
K | PHE53 |
K | LEU427 |
L | GLU63 |
L | CYS65 |
L | VAL66 |
L | GLY67 |
L | HIS69 |
L | LYS103 |
L | ARG104 |
L | THR105 |
L | GLY106 |
L | PRO107 |
L | TYR116 |
L | TRP120 |
L | HIS121 |
L | HIS124 |
L | VAL132 |
L | SER135 |
L | MET137 |
L | PRO138 |
L | TYR140 |
L | MET188 |
site_id | AH4 |
Number of Residues | 22 |
Details | binding site for Di-peptide HEC L 301 and CYS L 65 |
Chain | Residue |
K | PHE53 |
K | LEU427 |
L | TYR60 |
L | GLU63 |
L | GLY64 |
L | VAL66 |
L | GLY67 |
L | CYS68 |
L | HIS69 |
L | THR105 |
L | GLY106 |
L | PRO107 |
L | TYR116 |
L | TRP120 |
L | HIS121 |
L | HIS124 |
L | VAL132 |
L | SER135 |
L | MET137 |
L | PRO138 |
L | TYR140 |
L | MET188 |
site_id | AH5 |
Number of Residues | 27 |
Details | binding site for Di-peptide HEC M 402 and CYS M 233 |
Chain | Residue |
M | ARG166 |
M | ILE183 |
M | ALA184 |
M | ALA185 |
M | MET186 |
M | PRO187 |
M | TRP189 |
M | VAL205 |
M | TYR229 |
M | THR232 |
M | ALA234 |
M | VAL235 |
M | CYS236 |
M | HIS237 |
M | LEU247 |
M | GLY248 |
M | PRO250 |
M | LEU252 |
M | TRP258 |
M | ILE259 |
M | TYR260 |
M | GLY261 |
M | LEU267 |
M | THR270 |
M | ILE271 |
M | GLY277 |
M | HEC403 |
site_id | AH6 |
Number of Residues | 29 |
Details | binding site for Di-peptide HEC M 402 and CYS M 236 |
Chain | Residue |
M | ARG166 |
M | ILE183 |
M | ALA184 |
M | ALA185 |
M | MET186 |
M | PRO187 |
M | TRP189 |
M | VAL205 |
M | THR232 |
M | CYS233 |
M | ALA234 |
M | VAL235 |
M | HIS237 |
M | GLY238 |
M | MET244 |
M | LEU247 |
M | GLY248 |
M | ALA249 |
M | PRO250 |
M | LEU252 |
M | TRP258 |
M | ILE259 |
M | TYR260 |
M | GLY261 |
M | LEU267 |
M | THR270 |
M | ILE271 |
M | GLY277 |
M | HEC403 |
site_id | AH7 |
Number of Residues | 24 |
Details | binding site for Di-peptide HEC M 403 and CYS M 146 |
Chain | Residue |
L | TYR116 |
M | TYR142 |
M | CYS143 |
M | SER144 |
M | ILE145 |
M | HIS147 |
M | GLY148 |
M | GLY156 |
M | PHE157 |
M | PRO158 |
M | LEU160 |
M | TRP165 |
M | ARG166 |
M | TRP167 |
M | ILE174 |
M | SER177 |
M | ILE178 |
M | ALA184 |
M | GLY277 |
M | GLN278 |
M | MET279 |
M | PRO280 |
M | GLN282 |
M | HEC402 |
site_id | AH8 |
Number of Residues | 23 |
Details | binding site for Di-peptide HEC M 403 and CYS M 143 |
Chain | Residue |
L | TYR116 |
M | PHE139 |
M | TYR142 |
M | SER144 |
M | ILE145 |
M | CYS146 |
M | HIS147 |
M | GLY156 |
M | PRO158 |
M | LEU160 |
M | TRP165 |
M | ARG166 |
M | TRP167 |
M | ILE174 |
M | SER177 |
M | ILE178 |
M | ALA184 |
M | GLY277 |
M | GLN278 |
M | MET279 |
M | PRO280 |
M | GLN282 |
M | HEC402 |
Functional Information from PROSITE/UniProt
site_id | PS00077 |
Number of Residues | 56 |
Details | COX1_CUB Heme-copper oxidase catalytic subunit, copper B binding region signature. WWYGHNaVgffltagflgimyyfvpkqaerpvysyrlsivhfwalitvyiwagp.HH |
Chain | Residue | Details |
A | TRP203-HIS258 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 160 |
Details | TRANSMEM: Helical => ECO:0000269|PubMed:20576851 |
Chain | Residue | Details |
C | PHE4-ILE24 | |
D | LYS151-HIS156 | |
D | PRO227-ARG238 | |
D | MET292-ARG308 | |
D | PRO367-HIS384 | |
D | ASN454-ALA474 | |
G | MET1-GLN16 | |
G | GLN82-ALA96 | |
G | LYS151-HIS156 | |
G | PRO227-ARG238 | |
G | MET292-ARG308 | |
C | ARG56-TYR76 | |
G | PRO367-HIS384 | |
G | ASN454-ALA474 | |
K | MET1-GLN16 | |
K | GLN82-ALA96 | |
K | LYS151-HIS156 | |
K | PRO227-ARG238 | |
K | MET292-ARG308 | |
K | PRO367-HIS384 | |
K | ASN454-ALA474 | |
F | PHE4-ILE24 | |
F | ARG56-TYR76 | |
I | PHE4-ILE24 | |
I | ARG56-TYR76 | |
M | PHE4-ILE24 | |
M | ARG56-TYR76 | |
D | GLN82-ALA96 |
site_id | SWS_FT_FI2 |
Number of Residues | 16 |
Details | BINDING: covalent => ECO:0000269|PubMed:20576851 |
Chain | Residue | Details |
C | CYS143 | |
I | CYS146 | |
I | CYS233 | |
I | CYS236 | |
M | CYS143 | |
M | CYS146 | |
M | CYS233 | |
M | CYS236 | |
D | ILE157-VAL177 | |
D | GLY206-VAL226 | |
D | LEU239-LEU259 | |
C | CYS146 | |
D | LEU271-MET291 | |
D | PHE309-ILE329 | |
D | VAL346-VAL366 | |
D | PHE385-ALA405 | |
D | GLY433-TYR453 | |
G | PHE17-ALA37 | |
G | THR61-VAL81 | |
G | PHE97-PHE117 | |
G | ILE130-ALA150 | |
G | ILE157-VAL177 | |
C | CYS233 | |
G | GLY206-VAL226 | |
G | LEU239-LEU259 | |
G | LEU271-MET291 | |
G | PHE309-ILE329 | |
G | VAL346-VAL366 | |
G | PHE385-ALA405 | |
G | GLY433-TYR453 | |
K | PHE17-ALA37 | |
K | THR61-VAL81 | |
K | PHE97-PHE117 | |
C | CYS236 | |
K | ILE130-ALA150 | |
K | ILE157-VAL177 | |
K | GLY206-VAL226 | |
K | LEU239-LEU259 | |
K | LEU271-MET291 | |
K | PHE309-ILE329 | |
K | VAL346-VAL366 | |
K | PHE385-ALA405 | |
K | GLY433-TYR453 | |
F | CYS143 | |
F | CYS146 | |
F | CYS233 | |
F | CYS236 | |
I | CYS143 |
site_id | SWS_FT_FI3 |
Number of Residues | 16 |
Details | BINDING: axial binding residue => ECO:0000269|PubMed:20576851 |
Chain | Residue | Details |
C | HIS147 | |
I | MET186 | |
I | HIS237 | |
I | MET279 | |
M | HIS147 | |
M | MET186 | |
M | HIS237 | |
M | MET279 | |
G | LYS330-HIS345 | |
G | GLN406-PRO432 | |
K | GLN38-HIS60 | |
C | MET186 | |
K | THR118-PRO129 | |
K | ASN178-TYR205 | |
K | HIS260-SER270 | |
K | LYS330-HIS345 | |
K | GLN406-PRO432 | |
C | HIS237 | |
C | MET279 | |
F | HIS147 | |
F | MET186 | |
F | HIS237 | |
F | MET279 | |
I | HIS147 |
site_id | SWS_FT_FI4 |
Number of Residues | 12 |
Details | BINDING: axial binding residue => ECO:0000269|PubMed:20576851, ECO:0007744|PDB:3MK7 |
Chain | Residue | Details |
A | HIS60 | |
K | HIS60 | |
K | HIS345 | |
K | HIS347 | |
A | HIS345 | |
A | HIS347 | |
D | HIS60 | |
D | HIS345 | |
D | HIS347 | |
G | HIS60 | |
G | HIS345 | |
G | HIS347 |
site_id | SWS_FT_FI5 |
Number of Residues | 12 |
Details | BINDING: BINDING => ECO:0000269|PubMed:20576851, ECO:0007744|PDB:3MK7 |
Chain | Residue | Details |
A | HIS207 | |
K | HIS207 | |
K | HIS257 | |
K | HIS258 | |
A | HIS257 | |
A | HIS258 | |
D | HIS207 | |
D | HIS257 | |
D | HIS258 | |
G | HIS207 | |
G | HIS257 | |
G | HIS258 |