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5DDT

Crystal structure of IspD from Bacillus subtilis at 1.80 Angstroms resolution, crystal form I

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0008299biological_processisoprenoid biosynthetic process
A0016779molecular_functionnucleotidyltransferase activity
A0019288biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
A0050518molecular_function2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
A0070567molecular_functioncytidylyltransferase activity
B0003824molecular_functioncatalytic activity
B0008299biological_processisoprenoid biosynthetic process
B0016779molecular_functionnucleotidyltransferase activity
B0019288biological_processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
B0050518molecular_function2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
B0070567molecular_functioncytidylyltransferase activity
Functional Information from PROSITE/UniProt
site_idPS01295
Number of Residues8
DetailsISPD 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. VLVHDGAR
ChainResidueDetails
AVAL100-ARG107

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsSITE: Transition state stabilizer => ECO:0000250
ChainResidueDetails
AARG15
ALYS22
BARG15
BLYS22

site_idSWS_FT_FI2
Number of Residues4
DetailsSITE: Positions MEP for the nucleophilic attack => ECO:0000250
ChainResidueDetails
AARG152
ALYS209
BARG152
BLYS209

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PDB entries from 2024-10-30

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