5DBF
Crystal Structure of Iridoid Synthase from Cantharanthus roseus in complex with NADPH
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0016099 | biological_process | monoterpenoid biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
A | 0016628 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
A | 0042802 | molecular_function | identical protein binding |
A | 0042803 | molecular_function | protein homodimerization activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0016099 | biological_process | monoterpenoid biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
B | 0016628 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
B | 0042802 | molecular_function | identical protein binding |
B | 0042803 | molecular_function | protein homodimerization activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 24 |
Details | binding site for residue NDP A 401 |
Chain | Residue |
A | GLY36 |
A | VAL85 |
A | SER108 |
A | TRP109 |
A | MET121 |
A | GLN142 |
A | THR143 |
A | TYR178 |
A | PRO201 |
A | ALA202 |
A | VAL204 |
A | THR38 |
A | SER211 |
A | MET212 |
A | MET213 |
A | HOH516 |
A | HOH535 |
A | GLY39 |
A | ILE40 |
A | ALA65 |
A | ARG66 |
A | ARG67 |
A | CYS83 |
A | ASP84 |
site_id | AC2 |
Number of Residues | 25 |
Details | binding site for residue NDP B 401 |
Chain | Residue |
B | GLY36 |
B | THR38 |
B | GLY39 |
B | ILE40 |
B | ALA65 |
B | ARG66 |
B | ARG67 |
B | CYS83 |
B | ASP84 |
B | VAL85 |
B | SER108 |
B | TRP109 |
B | MET121 |
B | GLN142 |
B | THR143 |
B | TYR178 |
B | PRO201 |
B | ALA202 |
B | VAL204 |
B | SER211 |
B | MET212 |
B | MET213 |
B | HOH511 |
B | HOH552 |
B | HOH569 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 4 |
Details | ACT_SITE: ACT_SITE => ECO:0000269|PubMed:26768532 |
Chain | Residue | Details |
A | LYS146 | |
A | TYR178 | |
B | LYS146 | |
B | TYR178 |
site_id | SWS_FT_FI2 |
Number of Residues | 14 |
Details | BINDING: BINDING => ECO:0000269|PubMed:26551396, ECO:0000269|PubMed:26768532, ECO:0000269|PubMed:26868105, ECO:0007744|PDB:5COB, ECO:0007744|PDB:5DBF, ECO:0007744|PDB:5DF1 |
Chain | Residue | Details |
A | THR38 | |
B | ASP84 | |
B | SER108 | |
B | GLN142 | |
B | VAL204 | |
B | SER211 | |
A | ARG66 | |
A | ASP84 | |
A | SER108 | |
A | GLN142 | |
A | VAL204 | |
A | SER211 | |
B | THR38 | |
B | ARG66 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:26768532, ECO:0007744|PDB:5DBI |
Chain | Residue | Details |
A | LYS146 | |
B | LYS146 |
site_id | SWS_FT_FI4 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:26768532, ECO:0000269|PubMed:26868105, ECO:0007744|PDB:5COB, ECO:0007744|PDB:5DBI |
Chain | Residue | Details |
A | TYR178 | |
B | TYR178 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000269|PubMed:26768532, ECO:0000269|PubMed:26868105, ECO:0007744|PDB:5COB |
Chain | Residue | Details |
A | SER349 | |
B | SER349 |