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5D8T

RNA octamer containing (S)-5' methyl, 2'-F U.

Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue NCO A 101
ChainResidue
AA3
BHOH244
AU5M5
AU6
AHOH220
AHOH223
AHOH230
AHOH236
AHOH237
BHOH222

site_idAC2
Number of Residues10
Detailsbinding site for residue NCO A 102
ChainResidue
ACBV1
AG2
AA4
AU5M5
AHOH240
AHOH256
BHOH245
BHOH248
BHOH252
BHOH261

site_idAC3
Number of Residues12
Detailsbinding site for residue NCO B 101
ChainResidue
ACBV1
AG2
AHOH215
AHOH238
AHOH246
BG2
BA3
BHOH225
BHOH229
BHOH230
BHOH241
BHOH247

site_idAC4
Number of Residues6
Detailsbinding site for residue NCO B 102
ChainResidue
AC7
AG8
AHOH224
AHOH255
BA4
BHOH215

site_idAC5
Number of Residues21
Detailsbinding site for Di-nucleotide CBV B 1 and G B 2
ChainResidue
AA4
AC7
AG8
AHOH242
BA3
BG8
BNCO101
BHOH203
BHOH204
BHOH217
BHOH218
BHOH219
BHOH221
BHOH222
BHOH232
BHOH234
BHOH236
BHOH241
BHOH244
BHOH245
BHOH249

site_idAC6
Number of Residues25
Detailsbinding site for Di-nucleotide A B 4 and U5M B 5
ChainResidue
AA4
AU5M5
AU6
AU6
AHOH211
AHOH227
AHOH237
AHOH251
AHOH255
BA3
BU6
BNCO102
BHOH206
BHOH207
BHOH208
BHOH214
BHOH216
BHOH224
BHOH225
BHOH226
BHOH227
BHOH230
BHOH237
BHOH240
BHOH243

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PDB entries from 2024-07-24

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