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5D7N

Crystal structure of human Sirt3 at an improved resolution

Functional Information from GO Data
ChainGOidnamespacecontents
A0017136molecular_functionNAD-dependent histone deacetylase activity
A0051287molecular_functionNAD binding
A0070403molecular_functionNAD+ binding
B0017136molecular_functionNAD-dependent histone deacetylase activity
B0051287molecular_functionNAD binding
B0070403molecular_functionNAD+ binding
C0017136molecular_functionNAD-dependent histone deacetylase activity
C0051287molecular_functionNAD binding
C0070403molecular_functionNAD+ binding
D0017136molecular_functionNAD-dependent histone deacetylase activity
D0051287molecular_functionNAD binding
D0070403molecular_functionNAD+ binding
E0017136molecular_functionNAD-dependent histone deacetylase activity
E0051287molecular_functionNAD binding
E0070403molecular_functionNAD+ binding
F0017136molecular_functionNAD-dependent histone deacetylase activity
F0051287molecular_functionNAD binding
F0070403molecular_functionNAD+ binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 401
ChainResidue
ACYS256
ACYS259
ACYS280
ACYS283

site_idAC2
Number of Residues3
Detailsbinding site for residue PEG A 402
ChainResidue
AVAL292
APHE293
AHOH633

site_idAC3
Number of Residues2
Detailsbinding site for residue PEG A 404
ChainResidue
ACYS259
AGLN260

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 405
ChainResidue
AHOH680
FGLU375
FHOH571
FHOH584
FHOH628
FHOH645

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN B 401
ChainResidue
BCYS256
BCYS259
BCYS280
BCYS283

site_idAC6
Number of Residues6
Detailsbinding site for residue PEG B 402
ChainResidue
BHIS248
BVAL292
BPHE293
BPHE294
BHOH502
BHOH561

site_idAC7
Number of Residues4
Detailsbinding site for residue ZN C 401
ChainResidue
CCYS256
CCYS259
CCYS280
CCYS283

site_idAC8
Number of Residues4
Detailsbinding site for residue PEG C 402
ChainResidue
CPHE180
CHIS248
CVAL292
CHOH650

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN D 401
ChainResidue
DCYS256
DCYS259
DCYS280
DCYS283

site_idAD1
Number of Residues4
Detailsbinding site for residue PEG D 402
ChainResidue
DGLU323
DGOL404
DHOH690
FGLU181

site_idAD2
Number of Residues5
Detailsbinding site for residue 1PE D 403
ChainResidue
DGLN228
DHIS248
DVAL292
DPHE294
DGLY295

site_idAD3
Number of Residues6
Detailsbinding site for residue GOL D 404
ChainResidue
DLEU322
DGLU323
DGLU325
DPEG402
FTYR175
FGLU177

site_idAD4
Number of Residues4
Detailsbinding site for residue ZN E 401
ChainResidue
ECYS256
ECYS259
ECYS280
ECYS283

site_idAD5
Number of Residues6
Detailsbinding site for residue PGE E 402
ChainResidue
EARG158
EPHE180
EHIS248
EVAL292
EPHE294
EGLY295

site_idAD6
Number of Residues4
Detailsbinding site for residue ZN F 401
ChainResidue
FCYS256
FCYS259
FCYS280
FCYS283

site_idAD7
Number of Residues10
Detailsbinding site for residue PG4 F 402
ChainResidue
FARG158
FGLN228
FHIS248
FVAL292
FPHE294
FHOH502
FHOH505
FHOH570
FHOH617
FHOH636

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsACT_SITE: Proton acceptor => ECO:0000255|PROSITE-ProRule:PRU00236, ECO:0000269|PubMed:12186850, ECO:0000269|PubMed:16788062, ECO:0000269|PubMed:18794531
ChainResidueDetails
AHIS248
BHIS248
CHIS248
DHIS248
EHIS248
FHIS248

site_idSWS_FT_FI2
Number of Residues24
DetailsBINDING: BINDING => ECO:0000269|PubMed:23897466
ChainResidueDetails
AGLY145
CGLN228
CGLY319
CASN344
DGLY145
DGLN228
DGLY319
DASN344
EGLY145
EGLN228
EGLY319
AGLN228
EASN344
FGLY145
FGLN228
FGLY319
FASN344
AGLY319
AASN344
BGLY145
BGLN228
BGLY319
BASN344
CGLY145

site_idSWS_FT_FI3
Number of Residues24
DetailsBINDING: BINDING => ECO:0000269|PubMed:19535340, ECO:0000269|PubMed:23897466
ChainResidueDetails
ACYS256
CCYS259
CCYS280
CCYS283
DCYS256
DCYS259
DCYS280
DCYS283
ECYS256
ECYS259
ECYS280
ACYS259
ECYS283
FCYS256
FCYS259
FCYS280
FCYS283
ACYS280
ACYS283
BCYS256
BCYS259
BCYS280
BCYS283
CCYS256

site_idSWS_FT_FI4
Number of Residues6
DetailsMOD_RES: N6-succinyllysine => ECO:0000250|UniProtKB:Q8R104
ChainResidueDetails
ALYS122
BLYS122
CLYS122
DLYS122
ELYS122
FLYS122

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PDB entries from 2024-10-30

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