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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5D6O

Orthorhombic Crystal Structure of an acetylester hydrolase from Corynebacterium glutamicum

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003824	molecular_function	catalytic activity
A	0009058	biological_process	biosynthetic process
A	0016747	molecular_function	acyltransferase activity, transferring groups other than amino-acyl groups
A	0016787	molecular_function	hydrolase activity
B	0003824	molecular_function	catalytic activity
B	0009058	biological_process	biosynthetic process
B	0016747	molecular_function	acyltransferase activity, transferring groups other than amino-acyl groups
B	0016787	molecular_function	hydrolase activity
C	0003824	molecular_function	catalytic activity
C	0009058	biological_process	biosynthetic process
C	0016747	molecular_function	acyltransferase activity, transferring groups other than amino-acyl groups
C	0016787	molecular_function	hydrolase activity
D	0003824	molecular_function	catalytic activity
D	0009058	biological_process	biosynthetic process
D	0016747	molecular_function	acyltransferase activity, transferring groups other than amino-acyl groups
D	0016787	molecular_function	hydrolase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue CL A 401

Chain	Residue
A	TRP57
A	TYR58
A	SER142
A	MET143
A	GOL407

site_id	AC2
Number of Residues	3
Details	binding site for residue CL A 402

Chain	Residue
A	THR61
A	THR64
A	GOL410

site_id	AC3
Number of Residues	7
Details	binding site for residue MG A 403

Chain	Residue
A	HOH534
A	HOH540
A	HOH572
A	HOH672
A	HOH892
A	HOH905
A	HIS74

site_id	AC4
Number of Residues	8
Details	binding site for residue GOL A 404

Chain	Residue
A	LEU2
A	ASN4
A	TYR7
A	GLY92
A	SER96
A	ALA98
A	ASN99
A	HOH614

site_id	AC5
Number of Residues	7
Details	binding site for residue GOL A 405

Chain	Residue
A	GLU227
A	ARG230
A	GLU235
A	HOH513
A	HOH730
A	HOH760
B	GLN226

site_id	AC6
Number of Residues	8
Details	binding site for residue GOL A 406

Chain	Residue
A	PRO14
A	TYR15
A	GLU16
A	THR40
A	HOH588
C	ARG127
C	THR133
C	HOH665

site_id	AC7
Number of Residues	9
Details	binding site for residue GOL A 407

Chain	Residue
A	TRP57
A	TYR58
A	SER59
A	SER142
A	TRP214
A	HIS325
A	LEU326
A	PHE329
A	CL401

site_id	AC8
Number of Residues	2
Details	binding site for residue GOL A 408

Chain	Residue
A	ARG127
A	HOH542

site_id	AC9
Number of Residues	8
Details	binding site for residue GOL A 409

Chain	Residue
A	GLY13
A	PRO14
A	THR40
A	PHE66
A	HOH573
A	HOH580
A	HOH751
C	HOH665

site_id	AD1
Number of Residues	5
Details	binding site for residue GOL A 410

Chain	Residue
A	GLN63
A	THR64
A	CL402
A	HOH510
A	HOH530

site_id	AD2
Number of Residues	7
Details	binding site for residue GOL A 411

Chain	Residue
A	GLY233
A	GLU235
A	ALA306
A	LEU310
A	HOH501
A	HOH546
A	HOH615

site_id	AD3
Number of Residues	5
Details	binding site for residue CL B 401

Chain	Residue
B	TRP57
B	TYR58
B	SER142
B	MET143
B	HOH597

site_id	AD4
Number of Residues	3
Details	binding site for residue CL B 402

Chain	Residue
B	THR61
B	THR64
B	HOH700

site_id	AD5
Number of Residues	6
Details	binding site for residue MG B 403

Chain	Residue
B	HIS74
B	HOH580
B	HOH599
B	HOH624
B	HOH715
B	HOH894

site_id	AD6
Number of Residues	6
Details	binding site for residue GOL B 404

Chain	Residue
B	PRO97
B	MET107
B	SER108
B	PHE110
B	ASN255
B	ASN259

site_id	AD7
Number of Residues	7
Details	binding site for residue GOL B 405

Chain	Residue
B	LEU2
B	ASN4
B	TYR7
B	GLY92
B	ALA98
B	ASN99
B	HOH535

site_id	AD8
Number of Residues	8
Details	binding site for residue GOL B 406

Chain	Residue
A	ASP243
A	HOH613
B	LYS225
B	GLU227
B	HOH741
A	PRO173
A	GLU235
A	SER239

site_id	AD9
Number of Residues	5
Details	binding site for residue CL C 401

Chain	Residue
C	TRP57
C	TYR58
C	SER142
C	MET143
C	GOL404

site_id	AE1
Number of Residues	4
Details	binding site for residue CL C 402

Chain	Residue
C	GLY60
C	THR61
C	THR64
C	HOH676

site_id	AE2
Number of Residues	7
Details	binding site for residue MG C 403

Chain	Residue
C	ASP73
C	HIS74
C	HOH519
C	HOH556
C	HOH580
C	HOH718
C	HOH726

site_id	AE3
Number of Residues	7
Details	binding site for residue GOL C 404

Chain	Residue
C	TRP57
C	TYR58
C	SER142
C	HIS325
C	LEU326
C	PHE329
C	CL401

site_id	AE4
Number of Residues	6
Details	binding site for residue GOL C 405

Chain	Residue
C	ARG114
C	HIS266
C	ASP268
C	ARG271
C	HOH605
C	HOH624

site_id	AE5
Number of Residues	5
Details	binding site for residue CL D 401

Chain	Residue
D	TRP57
D	TYR58
D	SER142
D	MET143
D	GOL406

site_id	AE6
Number of Residues	4
Details	binding site for residue CL D 402

Chain	Residue
D	GLY60
D	THR61
D	THR64
D	HOH666

site_id	AE7
Number of Residues	6
Details	binding site for residue MG D 403

Chain	Residue
D	HIS74
D	HOH549
D	HOH605
D	HOH678
D	HOH684
D	HOH911

site_id	AE8
Number of Residues	5
Details	binding site for residue MG D 404

Chain	Residue
D	VAL11
D	GLN63
D	HOH810
D	HOH823
D	HOH973

site_id	AE9
Number of Residues	7
Details	binding site for residue GOL D 405

Chain	Residue
C	PRO173
C	LEU234
C	GLU235
C	SER239
D	LYS225
D	GLU227
D	HOH676

site_id	AF1
Number of Residues	9
Details	binding site for residue GOL D 406

Chain	Residue
D	TRP57
D	TYR58
D	SER59
D	SER142
D	TRP214
D	HIS325
D	LEU326
D	PHE329
D	CL401

site_id	AF2
Number of Residues	6
Details	binding site for residue GOL D 407

Chain	Residue
D	PRO97
D	MET107
D	PHE110
D	ASN255
D	ASN259
D	HOH631

site_id	AF3
Number of Residues	8
Details	binding site for residue GOL D 408

Chain	Residue
C	LEU2
C	ASN4
C	TYR7
C	GLY92
C	ALA98
C	ASN99
C	ASP253
D	HOH511

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1076
Details	Domain: {"description":"AB hydrolase-1","evidences":[{"evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	4
Details	Active site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"26787467","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	8
Details	Active site: {"evidences":[{"source":"PubMed","id":"26787467","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

246031

PDB entries from 2025-12-10

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