Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005737 | cellular_component | cytoplasm |
A | 0006400 | biological_process | tRNA modification |
A | 0008033 | biological_process | tRNA processing |
A | 0008616 | biological_process | queuosine biosynthetic process |
A | 0016491 | molecular_function | oxidoreductase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0051536 | molecular_function | iron-sulfur cluster binding |
A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
A | 0052693 | molecular_function | epoxyqueuosine reductase activity |
B | 0005737 | cellular_component | cytoplasm |
B | 0006400 | biological_process | tRNA modification |
B | 0008033 | biological_process | tRNA processing |
B | 0008616 | biological_process | queuosine biosynthetic process |
B | 0016491 | molecular_function | oxidoreductase activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0051536 | molecular_function | iron-sulfur cluster binding |
B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
B | 0052693 | molecular_function | epoxyqueuosine reductase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | binding site for residue SF4 A 501 |
Chain | Residue |
A | ALA153 |
A | LYS154 |
A | ASN155 |
A | CYS188 |
A | CYS191 |
A | CYS194 |
A | CYS247 |
A | PRO248 |
A | LEU249 |
site_id | AC2 |
Number of Residues | 6 |
Details | binding site for residue SF4 A 502 |
Chain | Residue |
A | CYS198 |
A | LEU209 |
A | CYS214 |
A | ILE215 |
A | CYS240 |
A | CYS243 |
site_id | AC3 |
Number of Residues | 39 |
Details | binding site for residue B12 A 503 |
Chain | Residue |
A | SER32 |
A | LEU33 |
A | ARG36 |
A | SER47 |
A | GLU50 |
A | ARG57 |
A | CYS97 |
A | ASP134 |
A | LEU138 |
A | SER139 |
A | ASP140 |
A | ARG141 |
A | ALA142 |
A | SER152 |
A | ASN155 |
A | CYS156 |
A | MSE157 |
A | ILE158 |
A | SER165 |
A | VAL167 |
A | LEU169 |
A | PRO206 |
A | GLY207 |
A | LEU209 |
A | SER216 |
A | GLY239 |
A | CYS240 |
A | ASP241 |
A | CYS243 |
A | GLN244 |
A | HOH643 |
A | HOH693 |
A | HOH731 |
A | HOH744 |
A | HOH758 |
A | HOH770 |
A | HOH779 |
A | HOH832 |
A | HOH844 |
site_id | AC4 |
Number of Residues | 8 |
Details | binding site for residue GOL A 504 |
Chain | Residue |
A | PHE49 |
A | ASP134 |
A | GLN220 |
A | TYR238 |
A | TRP294 |
A | HOH606 |
A | HOH660 |
A | HOH770 |
site_id | AC5 |
Number of Residues | 8 |
Details | binding site for residue PO4 A 505 |
Chain | Residue |
A | LYS112 |
A | HIS258 |
A | PRO259 |
A | GLU260 |
A | HOH673 |
A | HOH735 |
B | LYS354 |
B | LYS358 |
site_id | AC6 |
Number of Residues | 8 |
Details | binding site for residue PO4 A 506 |
Chain | Residue |
A | LYS354 |
A | LYS358 |
A | HOH679 |
A | HOH689 |
B | LYS112 |
B | HIS258 |
B | PRO259 |
B | GLU260 |
site_id | AC7 |
Number of Residues | 7 |
Details | binding site for residue SF4 B 501 |
Chain | Residue |
B | ALA153 |
B | LYS154 |
B | ASN155 |
B | CYS188 |
B | CYS191 |
B | CYS194 |
B | CYS247 |
site_id | AC8 |
Number of Residues | 8 |
Details | binding site for residue SF4 B 502 |
Chain | Residue |
B | CYS198 |
B | LEU203 |
B | LEU209 |
B | CYS214 |
B | ILE215 |
B | CYS240 |
B | THR242 |
B | CYS243 |
site_id | AC9 |
Number of Residues | 36 |
Details | binding site for residue B12 B 503 |
Chain | Residue |
B | CYS97 |
B | ASP134 |
B | LEU138 |
B | SER139 |
B | ASP140 |
B | ARG141 |
B | ALA142 |
B | SER152 |
B | ASN155 |
B | CYS156 |
B | MSE157 |
B | ILE158 |
B | SER165 |
B | VAL167 |
B | LEU169 |
B | PRO206 |
B | LEU209 |
B | SER216 |
B | GLY239 |
B | CYS240 |
B | ASP241 |
B | CYS243 |
B | GLN244 |
B | HOH641 |
B | HOH658 |
B | HOH659 |
B | HOH684 |
B | HOH688 |
B | HOH710 |
B | HOH777 |
B | SER32 |
B | LEU33 |
B | ARG36 |
B | SER47 |
B | GLU50 |
B | ARG57 |
site_id | AD1 |
Number of Residues | 7 |
Details | binding site for residue GOL B 504 |
Chain | Residue |
B | ASP134 |
B | GLN220 |
B | TYR238 |
B | TRP294 |
B | HOH606 |
B | HOH659 |
B | HOH716 |
Functional Information from PROSITE/UniProt
site_id | PS00198 |
Number of Residues | 12 |
Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CgSCTkCLdACP |
Chain | Residue | Details |
A | CYS188-PRO199 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | ASP134 | |
B | ASP134 | |
Chain | Residue | Details |
A | ARG57 | |
A | CYS191 | |
A | CYS194 | |
A | CYS198 | |
A | CYS214 | |
A | SER216 | |
A | CYS240 | |
A | CYS243 | |
A | CYS247 | |
B | ARG57 | |
B | CYS97 | |
A | CYS97 | |
B | ASP134 | |
B | SER139 | |
B | SER152 | |
B | ASN155 | |
B | ILE158 | |
B | LEU169 | |
B | CYS188 | |
B | CYS191 | |
B | CYS194 | |
B | CYS198 | |
A | ASP134 | |
B | CYS214 | |
B | SER216 | |
B | CYS240 | |
B | CYS243 | |
B | CYS247 | |
A | SER139 | |
A | SER152 | |
A | ASN155 | |
A | ILE158 | |
A | LEU169 | |
A | CYS188 | |
Chain | Residue | Details |
A | GLN220 | |
B | ASN280 | |
B | ARG281 | |
B | ARG295 | |
B | LYS297 | |
B | LYS298 | |
A | LYS222 | |
A | ASN280 | |
A | ARG281 | |
A | ARG295 | |
A | LYS297 | |
A | LYS298 | |
B | GLN220 | |
B | LYS222 | |