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5CXB

Structure of Ytm1 bound to the C-terminal domain of Erb1 in P21 21 2 space group

Functional Information from GO Data
ChainGOidnamespacecontents
A0000463biological_processmaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A0000466biological_processmaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005730cellular_componentnucleolus
A0006364biological_processrRNA processing
A0030687cellular_componentpreribosome, large subunit precursor
A0042254biological_processribosome biogenesis
A0042273biological_processribosomal large subunit biogenesis
A0043021molecular_functionribonucleoprotein complex binding
A0070545cellular_componentPeBoW complex
B0042254biological_processribosome biogenesis
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue EDO A 501
ChainResidue
ALYS181
AASP229
AHOH684
AHOH688

site_idAC2
Number of Residues5
Detailsbinding site for residue EDO A 502
ChainResidue
AASP64
ASER98
ALEU99
AASP417
AARG419

site_idAC3
Number of Residues3
Detailsbinding site for residue EDO A 503
ChainResidue
AILE41
AARG42
AGLY45

site_idAC4
Number of Residues5
Detailsbinding site for residue NA A 504
ChainResidue
AGLU442
AARG443
ATRP446
AARG454
AHOH829

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL A 505
ChainResidue
ATHR58
ASER60
AILE61
ALYS256
AALA257
AARG287

site_idAC6
Number of Residues1
Detailsbinding site for residue CL B 901
ChainResidue
BGLN487

site_idAC7
Number of Residues5
Detailsbinding site for residue GOL B 902
ChainResidue
BHIS597
BARG598
BARG599
BARG645
BPRO646

Functional Information from PROSITE/UniProt
site_idPS00678
Number of Residues15
DetailsWD_REPEATS_1 Trp-Asp (WD) repeats signature. LATGgdDgTVRVWEL
ChainResidueDetails
BLEU468-LEU482
AVAL146-ALA160
ALEU404-LEU418

222036

PDB entries from 2024-07-03

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