5CH4
Peptide-Bound State of Thermus thermophilus SecYEG
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| E | 0005886 | cellular_component | plasma membrane |
| E | 0006605 | biological_process | protein targeting |
| E | 0006886 | biological_process | intracellular protein transport |
| E | 0008320 | molecular_function | protein transmembrane transporter activity |
| E | 0009306 | biological_process | protein secretion |
| E | 0015031 | biological_process | protein transport |
| E | 0016020 | cellular_component | membrane |
| E | 0043952 | biological_process | protein transport by the Sec complex |
| E | 0065002 | biological_process | intracellular protein transmembrane transport |
| G | 0009306 | biological_process | protein secretion |
| G | 0015450 | molecular_function | protein-transporting ATPase activity |
| G | 0016020 | cellular_component | membrane |
| Y | 0005048 | molecular_function | signal sequence binding |
| Y | 0005886 | cellular_component | plasma membrane |
| Y | 0006605 | biological_process | protein targeting |
| Y | 0006616 | biological_process | SRP-dependent cotranslational protein targeting to membrane, translocation |
| Y | 0008320 | molecular_function | protein transmembrane transporter activity |
| Y | 0015031 | biological_process | protein transport |
| Y | 0016020 | cellular_component | membrane |
| Y | 0031522 | cellular_component | cell envelope Sec protein transport complex |
| Y | 0043952 | biological_process | protein transport by the Sec complex |
| Y | 0065002 | biological_process | intracellular protein transmembrane transport |
Functional Information from PROSITE/UniProt
| site_id | PS00430 |
| Number of Residues | 27 |
| Details | TONB_DEPENDENT_REC_1 TonB-dependent receptor (TBDR) proteins signature 1. mvkafwsalqipelrqrvl................................................................................................FTLLVLAA |
| Chain | Residue | Details |
| Y | MET1-ALA27 |
| site_id | PS01067 |
| Number of Residues | 29 |
| Details | SECE_SEC61G Protein secE/sec61-gamma signature. YfQEaRaeLaRvtWPtreQvvegtQAILL |
| Chain | Residue | Details |
| E | TYR8-LEU36 |
| site_id | PS00756 |
| Number of Residues | 18 |
| Details | SECY_2 Protein secY signature 2. WMaErITey.GIGNGtSLI |
| Chain | Residue | Details |
| Y | TRP170-ILE187 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 30 |
| Details | TOPO_DOM: Cytoplasmic |
| Chain | Residue | Details |
| E | MET1-THR31 | |
| Y | GLN88-TYR114 | |
| Y | THR176-ASN182 | |
| Y | ALA232-ILE274 | |
| Y | THR327-LEU375 |
| site_id | SWS_FT_FI2 |
| Number of Residues | 20 |
| Details | TRANSMEM: Helical |
| Chain | Residue | Details |
| E | GLN32-PHE52 |
| site_id | SWS_FT_FI3 |
| Number of Residues | 7 |
| Details | TOPO_DOM: Extracellular |
| Chain | Residue | Details |
| E | ARG53-ARG60 | |
| Y | ALA131-VAL157 | |
| Y | ARG202-LEU214 | |
| Y | GLN292-PRO306 | |
| Y | SER393-ALA395 |
| site_id | SWS_FT_FI4 |
| Number of Residues | 30 |
| Details | TRANSMEM: Discontinuously helical; Name=2 |
| Chain | Residue | Details |
| Y | GLY57-MET87 |
| site_id | SWS_FT_FI5 |
| Number of Residues | 10 |
| Details | INTRAMEM: Helical; Name=Helix 2A |
| Chain | Residue | Details |
| Y | GLY57-PHE67 |
| site_id | SWS_FT_FI6 |
| Number of Residues | 3 |
| Details | INTRAMEM: |
| Chain | Residue | Details |
| Y | GLU68-SER71 |
| site_id | SWS_FT_FI7 |
| Number of Residues | 15 |
| Details | INTRAMEM: Helical; Name=Helix 2B |
| Chain | Residue | Details |
| Y | ILE72-MET87 |
| site_id | SWS_FT_FI8 |
| Number of Residues | 15 |
| Details | TRANSMEM: Helical; Name=3 |
| Chain | Residue | Details |
| Y | THR115-LEU130 |
| site_id | SWS_FT_FI9 |
| Number of Residues | 17 |
| Details | TRANSMEM: Helical; Name=4 |
| Chain | Residue | Details |
| Y | VAL158-ILE175 |
| site_id | SWS_FT_FI10 |
| Number of Residues | 18 |
| Details | TRANSMEM: Helical; Name=5 |
| Chain | Residue | Details |
| Y | GLY183-LEU201 |
| site_id | SWS_FT_FI11 |
| Number of Residues | 16 |
| Details | TRANSMEM: Helical; Name=6 |
| Chain | Residue | Details |
| Y | VAL215-MET231 |
| site_id | SWS_FT_FI12 |
| Number of Residues | 16 |
| Details | TRANSMEM: Helical; Name=7 |
| Chain | Residue | Details |
| Y | ILE275-PHE291 |
| site_id | SWS_FT_FI13 |
| Number of Residues | 19 |
| Details | TRANSMEM: Helical; Name=8 |
| Chain | Residue | Details |
| Y | THR307-TYR326 |
| site_id | SWS_FT_FI14 |
| Number of Residues | 16 |
| Details | TRANSMEM: Helical; Name=9 |
| Chain | Residue | Details |
| Y | GLY376-HIS392 |
| site_id | SWS_FT_FI15 |
| Number of Residues | 15 |
| Details | TRANSMEM: Helical; Name=10 |
| Chain | Residue | Details |
| Y | PHE396-THR411 |
| site_id | SWS_FT_FI16 |
| Number of Residues | 29 |
| Details | TOPO_DOM: Cytoplasmic => ECO:0000305 |
| Chain | Residue | Details |
| Y | LEU412-HIS441 |
