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5CBU

Human Cyclophilin D Complexed with Inhibitor.

Functional Information from GO Data
ChainGOidnamespacecontents
A0000413biological_processprotein peptidyl-prolyl isomerization
A0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
A0006457biological_processprotein folding
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue K A 201
ChainResidue
APGE204
APGE204

site_idAC2
Number of Residues4
Detailsbinding site for residue PG4 A 202
ChainResidue
AVAL93
APRO95
AHIS131
AHOH357

site_idAC3
Number of Residues7
Detailsbinding site for residue EDO A 203
ChainResidue
AHOH328
AHOH399
AHOH409
AHOH410
APHE46
AGLY47
ALYS49

site_idAC4
Number of Residues6
Detailsbinding site for residue PGE A 204
ChainResidue
APRO58
ASER59
ATRP121
ALYS148
AK201
AK201

site_idAC5
Number of Residues14
Detailsbinding site for residue 4ZM A 205
ChainResidue
AARG55
AGLN63
AGLY72
ATHR73
ATHR73
AARG82
AALA101
AASN102
AALA103
ATHR107
AGLN111
APHE113
AHIS126
AHOH375

site_idAC6
Number of Residues10
Detailsbinding site for residue 4ZM A 206
ChainResidue
ATHR52
AHIS54
AHIS70
AASN71
AALA103
AGLY104
ASER153
ALYS154
ALYS155
AHOH303

Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgStFHRVIpsFMcQAG
ChainResidueDetails
ATYR48-GLY65

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues156
DetailsDomain: {"description":"PPIase cyclophilin-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00156","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsModified residue: {"description":"N6-succinyllysine; alternate","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues3
DetailsModified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues1
DetailsModified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues1
DetailsModified residue: {"description":"S-nitrosocysteine","evidences":[{"source":"UniProtKB","id":"Q99KR7","evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

240971

PDB entries from 2025-08-27

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