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5C9F

Crystal structure of a retropepsin-like aspartic protease from Rickettsia conorii

Functional Information from GO Data
ChainGOidnamespacecontents
A0004190molecular_functionaspartic-type endopeptidase activity
A0006508biological_processproteolysis
B0004190molecular_functionaspartic-type endopeptidase activity
B0006508biological_processproteolysis
C0004190molecular_functionaspartic-type endopeptidase activity
C0006508biological_processproteolysis
D0004190molecular_functionaspartic-type endopeptidase activity
D0006508biological_processproteolysis
Functional Information from PDB Data
site_idAC1
Number of Residues3
Detailsbinding site for residue CL A 301
ChainResidue
AASN119
AARG120
DLYS136

site_idAC2
Number of Residues3
Detailsbinding site for residue CL A 302
ChainResidue
ALYS218
ATYR231
AALA232

site_idAC3
Number of Residues2
Detailsbinding site for residue CL A 303
ChainResidue
AARG216
AHOH417

site_idAC4
Number of Residues2
Detailsbinding site for residue CL A 304
ChainResidue
AALA233
AGLU191

site_idAC5
Number of Residues3
Detailsbinding site for residue CL B 301
ChainResidue
BLYS218
BTYR231
BALA232

site_idAC6
Number of Residues4
Detailsbinding site for residue NA B 302
ChainResidue
BGLY200
BGLY202
BLEU204
DCL304

site_idAC7
Number of Residues3
Detailsbinding site for residue CL C 301
ChainResidue
AARG167
ATHR168
CILE222

site_idAC8
Number of Residues4
Detailsbinding site for residue CL C 302
ChainResidue
CLYS190
CLYS218
CTYR231
CALA232

site_idAC9
Number of Residues2
Detailsbinding site for residue CL C 303
ChainResidue
CLYS196
CARG216

site_idAD1
Number of Residues4
Detailsbinding site for residue CL D 301
ChainResidue
DLYS190
DLYS218
DTYR231
DALA232

site_idAD2
Number of Residues4
Detailsbinding site for residue CL D 302
ChainResidue
DILE195
DLYS196
DARG216
DHOH408

site_idAD3
Number of Residues4
Detailsbinding site for residue CL D 303
ChainResidue
DLYS150
DGLY202
DLEU204
DNA306

site_idAD4
Number of Residues4
Detailsbinding site for residue CL D 304
ChainResidue
BLYS150
BLEU204
BNA302
DASN132

site_idAD5
Number of Residues4
Detailsbinding site for residue NA D 305
ChainResidue
DLYS150
DASP203
DHOH412
DHOH449

site_idAD6
Number of Residues7
Detailsbinding site for residue NA D 306
ChainResidue
DLYS150
DGLY200
DGLY202
DLEU204
DCL303
DHOH405
DHOH433

Functional Information from PROSITE/UniProt
site_idPS00141
Number of Residues12
DetailsASP_PROTEASE Eukaryotic and viral aspartyl proteases active site. FMVDTGASDIAL
ChainResidueDetails
APHE137-LEU148

224931

PDB entries from 2024-09-11

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