5C6M

Crystal structure of deoxyribose-phosphate aldolase from Shewanella halifaxensis

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0003824	molecular_function	catalytic activity
A	0004139	molecular_function	deoxyribose-phosphate aldolase activity
A	0005737	cellular_component	cytoplasm
A	0009264	biological_process	deoxyribonucleotide catabolic process
A	0016052	biological_process	carbohydrate catabolic process
A	0016829	molecular_function	lyase activity
A	0046386	biological_process	deoxyribose phosphate catabolic process
B	0003824	molecular_function	catalytic activity
B	0004139	molecular_function	deoxyribose-phosphate aldolase activity
B	0005737	cellular_component	cytoplasm
B	0009264	biological_process	deoxyribonucleotide catabolic process
B	0016052	biological_process	carbohydrate catabolic process
B	0016829	molecular_function	lyase activity
B	0046386	biological_process	deoxyribose phosphate catabolic process
C	0003824	molecular_function	catalytic activity
C	0004139	molecular_function	deoxyribose-phosphate aldolase activity
C	0005737	cellular_component	cytoplasm
C	0009264	biological_process	deoxyribonucleotide catabolic process
C	0016052	biological_process	carbohydrate catabolic process
C	0016829	molecular_function	lyase activity
C	0046386	biological_process	deoxyribose phosphate catabolic process
D	0003824	molecular_function	catalytic activity
D	0004139	molecular_function	deoxyribose-phosphate aldolase activity
D	0005737	cellular_component	cytoplasm
D	0009264	biological_process	deoxyribonucleotide catabolic process
D	0016052	biological_process	carbohydrate catabolic process
D	0016829	molecular_function	lyase activity
D	0046386	biological_process	deoxyribose phosphate catabolic process

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	binding site for residue NA A 301

Chain	Residue
A	PHE76
A	HOH484
A	HOH553
A	HOH610
A	HOH634
B	HOH674

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site_id	AC2
Number of Residues	4
Details	binding site for residue CL A 302

Chain	Residue
A	HOH688
A	PRO50
A	ARG51
A	HOH482

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site_id	AC3
Number of Residues	6
Details	binding site for residue NA B 301

Chain	Residue
A	HOH689
B	PHE76
B	HOH523
B	HOH525
B	HOH581
B	HOH623

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site_id	AC4
Number of Residues	4
Details	binding site for residue CL B 302

Chain	Residue
A	HOH482
B	PRO50
B	ARG51
B	HOH668

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site_id	AC5
Number of Residues	4
Details	binding site for residue CL C 301

Chain	Residue
C	PRO50
C	ARG51
C	HOH569
D	ARG51

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site_id	AC6
Number of Residues	4
Details	binding site for residue CL D 301

Chain	Residue
C	HOH432
D	PRO50
D	ARG51
D	HOH493

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	8
Details	ACT_SITE: Proton donor/acceptor => ECO:0000255|HAMAP-Rule:MF_00592

Chain	Residue	Details
A	ASP102
A	LYS198
B	ASP102
B	LYS198
C	ASP102
C	LYS198
D	ASP102
D	LYS198

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site_id	SWS_FT_FI2
Number of Residues	4
Details	ACT_SITE: Schiff-base intermediate with acetaldehyde => ECO:0000255|HAMAP-Rule:MF_00592

Chain	Residue	Details
A	LYS166
B	LYS166
C	LYS166
D	LYS166

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