5C3Q
Crystal structure of the full-length Neurospora crassa T7H in complex with alpha-KG and thymine (T)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0044283 | biological_process | small molecule biosynthetic process |
A | 0046872 | molecular_function | metal ion binding |
A | 0051213 | molecular_function | dioxygenase activity |
A | 1901362 | biological_process | organic cyclic compound biosynthetic process |
B | 0044283 | biological_process | small molecule biosynthetic process |
B | 0046872 | molecular_function | metal ion binding |
B | 0051213 | molecular_function | dioxygenase activity |
B | 1901362 | biological_process | organic cyclic compound biosynthetic process |
C | 0044283 | biological_process | small molecule biosynthetic process |
C | 0046872 | molecular_function | metal ion binding |
C | 0051213 | molecular_function | dioxygenase activity |
C | 1901362 | biological_process | organic cyclic compound biosynthetic process |
D | 0044283 | biological_process | small molecule biosynthetic process |
D | 0046872 | molecular_function | metal ion binding |
D | 0051213 | molecular_function | dioxygenase activity |
D | 1901362 | biological_process | organic cyclic compound biosynthetic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue NI A 401 |
Chain | Residue |
A | HIS214 |
A | ASP216 |
A | HIS271 |
A | AKG402 |
A | HOH503 |
site_id | AC2 |
Number of Residues | 15 |
Details | binding site for residue AKG A 402 |
Chain | Residue |
A | ASP216 |
A | LEU223 |
A | HIS271 |
A | VAL273 |
A | ARG286 |
A | SER288 |
A | PHE292 |
A | NI401 |
A | HOH503 |
A | HOH640 |
A | HOH641 |
A | ARG190 |
A | LEU192 |
A | TYR194 |
A | HIS214 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue TDR A 403 |
Chain | Residue |
A | ASN87 |
A | ARG190 |
A | ASP216 |
A | TYR217 |
A | PHE292 |
A | HOH515 |
A | HOH530 |
A | HOH555 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue EDO A 404 |
Chain | Residue |
A | THR42 |
A | PRO236 |
A | THR269 |
A | HOH512 |
A | HOH514 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue EDO A 405 |
Chain | Residue |
A | TRP81 |
A | SER91 |
A | GLU122 |
A | ARG190 |
A | HOH531 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue EDO A 406 |
Chain | Residue |
A | TYR324 |
A | GLN327 |
B | GLU317 |
site_id | AC7 |
Number of Residues | 5 |
Details | binding site for residue EDO A 407 |
Chain | Residue |
A | ARG260 |
B | ARG260 |
B | TYR316 |
B | GLU317 |
B | HOH572 |
site_id | AC8 |
Number of Residues | 4 |
Details | binding site for residue EDO A 408 |
Chain | Residue |
A | ILE51 |
A | ILE53 |
A | ARG58 |
A | HOH509 |
site_id | AC9 |
Number of Residues | 5 |
Details | binding site for residue NI B 401 |
Chain | Residue |
B | HIS214 |
B | ASP216 |
B | HIS271 |
B | AKG402 |
B | HOH516 |
site_id | AD1 |
Number of Residues | 15 |
Details | binding site for residue AKG B 402 |
Chain | Residue |
B | ARG190 |
B | LEU192 |
B | TYR194 |
B | HIS214 |
B | ASP216 |
B | LEU223 |
B | HIS271 |
B | VAL273 |
B | ARG286 |
B | SER288 |
B | PHE292 |
B | NI401 |
B | HOH504 |
B | HOH516 |
B | HOH613 |
site_id | AD2 |
Number of Residues | 8 |
Details | binding site for residue TDR B 403 |
Chain | Residue |
B | ASN87 |
B | ARG190 |
B | ASP216 |
B | TYR217 |
B | PHE292 |
B | HOH518 |
B | HOH523 |
B | HOH538 |
site_id | AD3 |
Number of Residues | 7 |
Details | binding site for residue EDO B 404 |
Chain | Residue |
B | THR42 |
B | ALA43 |
B | PRO236 |
B | LYS267 |
B | THR269 |
B | HOH501 |
B | HOH548 |
site_id | AD4 |
Number of Residues | 7 |
Details | binding site for residue EDO B 405 |
Chain | Residue |
A | PRO236 |
A | ASN237 |
B | GLY10 |
B | LEU11 |
B | VAL12 |
B | THR42 |
B | PRO236 |
site_id | AD5 |
Number of Residues | 7 |
Details | binding site for residue EDO B 406 |
Chain | Residue |
A | GLU213 |
A | HIS214 |
A | THR215 |
A | VAL270 |
B | GLU313 |
B | HOH505 |
B | HOH511 |
site_id | AD6 |
Number of Residues | 2 |
Details | binding site for residue EDO B 407 |
Chain | Residue |
B | ASP174 |
B | PRO305 |
site_id | AD7 |
Number of Residues | 5 |
Details | binding site for residue EDO B 408 |
Chain | Residue |
A | ARG314 |
A | TYR316 |
A | GLU317 |
B | TYR324 |
B | GLN327 |
site_id | AD8 |
Number of Residues | 4 |
Details | binding site for residue EDO B 409 |
Chain | Residue |
B | GLN232 |
B | PHE240 |
B | ARG272 |
B | HOH582 |
site_id | AD9 |
Number of Residues | 5 |
Details | binding site for residue NI C 401 |
Chain | Residue |
C | HIS214 |
C | ASP216 |
C | HIS271 |
C | AKG402 |
C | HOH504 |
site_id | AE1 |
Number of Residues | 14 |
Details | binding site for residue AKG C 402 |
Chain | Residue |
C | ARG190 |
C | LEU192 |
C | TYR194 |
C | HIS214 |
C | ASP216 |
C | LEU223 |
C | LEU231 |
C | HIS271 |
C | VAL273 |
C | ARG286 |
C | SER288 |
C | PHE292 |
C | NI401 |
C | HOH504 |
site_id | AE2 |
Number of Residues | 7 |
Details | binding site for residue TDR C 403 |
Chain | Residue |
C | ASN87 |
C | ARG190 |
C | ASP216 |
C | TYR217 |
C | PHE292 |
C | HOH505 |
C | HOH533 |
site_id | AE3 |
Number of Residues | 5 |
Details | binding site for residue EDO C 404 |
Chain | Residue |
C | LYS234 |
C | SER235 |
C | THR269 |
C | HOH511 |
C | HOH537 |
site_id | AE4 |
Number of Residues | 2 |
Details | binding site for residue EDO C 405 |
Chain | Residue |
C | ARG260 |
C | GLU317 |
site_id | AE5 |
Number of Residues | 5 |
Details | binding site for residue NI D 401 |
Chain | Residue |
D | HIS214 |
D | ASP216 |
D | HIS271 |
D | AKG402 |
D | HOH506 |
site_id | AE6 |
Number of Residues | 14 |
Details | binding site for residue AKG D 402 |
Chain | Residue |
D | ARG190 |
D | LEU192 |
D | TYR194 |
D | HIS214 |
D | ASP216 |
D | LEU223 |
D | HIS271 |
D | VAL273 |
D | ARG286 |
D | SER288 |
D | PHE292 |
D | NI401 |
D | HOH506 |
D | HOH577 |
site_id | AE7 |
Number of Residues | 7 |
Details | binding site for residue TDR D 403 |
Chain | Residue |
D | ASN87 |
D | ARG190 |
D | ASP216 |
D | TYR217 |
D | PHE292 |
D | HOH508 |
D | HOH537 |
site_id | AE8 |
Number of Residues | 3 |
Details | binding site for residue EDO D 404 |
Chain | Residue |
D | GLU8 |
D | PHE240 |
D | ASP242 |
site_id | AE9 |
Number of Residues | 5 |
Details | binding site for residue EDO D 405 |
Chain | Residue |
D | LYS234 |
D | SER235 |
D | THR269 |
D | HOH551 |
D | HOH586 |
site_id | AF1 |
Number of Residues | 4 |
Details | binding site for residue EDO D 406 |
Chain | Residue |
D | GLU302 |
D | ALA303 |
D | ARG314 |
D | HOH511 |