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5BX4

Crystal structure of Thermoanaerobacterium xylanolyticum GH116 beta-glucosidase with Glucoimidazole

Functional Information from GO Data
ChainGOidnamespacecontents
A0004348molecular_functionglucosylceramidase activity
A0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds
A0005975biological_processcarbohydrate metabolic process
A0006680biological_processglucosylceramide catabolic process
A0008422molecular_functionbeta-glucosidase activity
A0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue GIM A 901
ChainResidue
AGLU441
ATRP732
AGLU777
AARG786
ATYR790
AARG792
AGOL906
AHOH1295
ATYR445
ATHR450
AASP452
AHIS507
ATYR523
ATRP531
ATHR591
AASP593

site_idAC2
Number of Residues4
Detailsbinding site for residue GOL A 902
ChainResidue
AARG432
ATHR433
AASN434
AGOL918

site_idAC3
Number of Residues6
Detailsbinding site for residue GOL A 903
ChainResidue
ATRP421
AASN434
AASN435
AGLN471
AHOH1104
AHOH1275

site_idAC4
Number of Residues4
Detailsbinding site for residue GOL A 904
ChainResidue
AGLY362
ALYS363
AASN364
AHOH1053

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL A 905
ChainResidue
ATRP595
ASER596
APHE654
ASER658
AHIS660
AASP722
ASER724

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL A 906
ChainResidue
ATRP525
AASP593
AGLN727
AARG786
AGIM901
AHOH1031
AHOH1259
AHOH1485

site_idAC7
Number of Residues4
Detailsbinding site for residue GOL A 907
ChainResidue
ATRP389
AILE393
ATRP797
AHOH1025

site_idAC8
Number of Residues8
Detailsbinding site for residue GOL A 908
ChainResidue
AILE65
APRO310
APHE443
AASP444
ATYR513
AHOH1022
AHOH1122
AHOH1174

site_idAC9
Number of Residues9
Detailsbinding site for residue GOL A 909
ChainResidue
ATRP44
ATHR45
AILE46
AGLU50
ATYR764
AASP765
ALYS766
ATRP772
AHOH1230

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL A 910
ChainResidue
ATHR566
AASP569
ALYS570
AHOH1001
AHOH1009
AHOH1106

site_idAD2
Number of Residues7
Detailsbinding site for residue GOL A 911
ChainResidue
ALYS175
ALYS196
AGLU383
AASP387
AHOH1006
AHOH1098
AHOH1196

site_idAD3
Number of Residues7
Detailsbinding site for residue GOL A 912
ChainResidue
AILE181
APRO182
ATYR183
AASN184
AMET385
AGLU723
AHOH1136

site_idAD4
Number of Residues6
Detailsbinding site for residue GOL A 913
ChainResidue
ATYR103
ATHR104
ATHR105
AHOH1018
AHOH1133
AHOH1168

site_idAD5
Number of Residues6
Detailsbinding site for residue GOL A 914
ChainResidue
AASP484
AILE518
ALYS519
AILE520
AHOH1210
AHOH1265

site_idAD6
Number of Residues4
Detailsbinding site for residue GOL A 915
ChainResidue
AGLU245
AILE277
AHOH1103
ALYS238

site_idAD7
Number of Residues11
Detailsbinding site for residue GOL A 916
ChainResidue
AASP577
AASP579
AASP583
AGLY599
ATHR600
AGLU645
ATHR656
AGLU657
ACA919
AHOH1037
AHOH1199

site_idAD8
Number of Residues7
Detailsbinding site for residue GOL A 917
ChainResidue
AVAL60
ALYS61
ATYR62
ALYS312
AHOH1016
AHOH1139
AHOH1485

site_idAD9
Number of Residues9
Detailsbinding site for residue GOL A 918
ChainResidue
AASN434
AMET436
AGLN471
AARG474
AGLN475
AASP478
ATYR559
AGOL902
AHOH1314

site_idAE1
Number of Residues7
Detailsbinding site for residue CA A 919
ChainResidue
AASP575
AASP577
AASP579
AILE581
AASP583
AGOL916
AHOH1199

site_idAE2
Number of Residues11
Detailsbinding site for residue EDO A 920
ChainResidue
AGLY81
ATHR82
AHIS95
AILE98
AALA415
AASP416
AGLY417
AGLY418
ATHR419
AHOH1070
AHOH1218

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PDB entries from 2026-03-25

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