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5BTE

Crystal structure of Ashbya gossypii Rai1 in complex with pU(S)6-Mn2+

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000956biological_processnuclear-transcribed mRNA catabolic process
A0003723molecular_functionRNA binding
A0004527molecular_functionexonuclease activity
A0005634cellular_componentnucleus
A0005829cellular_componentcytosol
A0006397biological_processmRNA processing
A0034353molecular_functionmRNA 5'-diphosphatase activity
A0046872molecular_functionmetal ion binding
A0110155biological_processNAD-cap decapping
B0000166molecular_functionnucleotide binding
B0000956biological_processnuclear-transcribed mRNA catabolic process
B0003723molecular_functionRNA binding
B0004527molecular_functionexonuclease activity
B0005634cellular_componentnucleus
B0005829cellular_componentcytosol
B0006397biological_processmRNA processing
B0034353molecular_functionmRNA 5'-diphosphatase activity
B0046872molecular_functionmetal ion binding
B0110155biological_processNAD-cap decapping
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MN B 401
ChainResidue
BASP217
BGLU235
BLEU236
BHOH535
DU2

site_idAC2
Number of Residues6
Detailsbinding site for residue MN B 402
ChainResidue
BHOH572
DU2
BGLU215
BASP217
BHOH530
BHOH552

site_idAC3
Number of Residues6
Detailsbinding site for residue MN B 403
ChainResidue
BHOH515
BHOH531
BHOH538
BHOH541
BHOH543
BHOH623

site_idAC4
Number of Residues8
Detailsbinding site for residue SO4 B 404
ChainResidue
BARG106
BGLY107
BLYS198
BGLY213
BALA214
BGLU215
BHOH532
BHOH593

site_idAC5
Number of Residues5
Detailsbinding site for residue MN C 401
ChainResidue
AASP217
AGLU235
ALEU236
AHOH540
CU2

site_idAC6
Number of Residues6
Detailsbinding site for residue MN C 402
ChainResidue
AGLU215
AASP217
AHOH527
AHOH536
AHOH598
CU2

site_idAC7
Number of Residues6
Detailsbinding site for residue MN A 401
ChainResidue
AHOH504
AHOH522
AHOH539
AHOH545
AHOH565
AHOH604

site_idAC8
Number of Residues8
Detailsbinding site for residue SO4 A 402
ChainResidue
AARG106
AGLY107
ALYS198
AGLY213
AALA214
AGLU215
AHOH524
AHOH607

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:O70348
ChainResidueDetails
BPHE105
BGLU215
BLYS237
BGLN261
APHE105
AGLU215
ALYS237
AGLN261

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: BINDING => ECO:0000250|UniProtKB:A3LNL5
ChainResidueDetails
BGLU166
AGLU166

site_idSWS_FT_FI3
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:26101253, ECO:0007744|PDB:5BTE
ChainResidueDetails
BASP217
BGLU235
BLEU236
AASP217
AGLU235
ALEU236

224201

PDB entries from 2024-08-28

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