Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003824 | molecular_function | catalytic activity |
A | 0005524 | molecular_function | ATP binding |
A | 0005737 | cellular_component | cytoplasm |
A | 0005829 | cellular_component | cytosol |
A | 0008360 | biological_process | regulation of cell shape |
A | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
A | 0009252 | biological_process | peptidoglycan biosynthetic process |
A | 0016874 | molecular_function | ligase activity |
A | 0046872 | molecular_function | metal ion binding |
A | 0071555 | biological_process | cell wall organization |
B | 0003824 | molecular_function | catalytic activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0005829 | cellular_component | cytosol |
B | 0008360 | biological_process | regulation of cell shape |
B | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
B | 0009252 | biological_process | peptidoglycan biosynthetic process |
B | 0016874 | molecular_function | ligase activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0071555 | biological_process | cell wall organization |
C | 0003824 | molecular_function | catalytic activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0005829 | cellular_component | cytosol |
C | 0008360 | biological_process | regulation of cell shape |
C | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
C | 0009252 | biological_process | peptidoglycan biosynthetic process |
C | 0016874 | molecular_function | ligase activity |
C | 0046872 | molecular_function | metal ion binding |
C | 0071555 | biological_process | cell wall organization |
D | 0003824 | molecular_function | catalytic activity |
D | 0005524 | molecular_function | ATP binding |
D | 0005737 | cellular_component | cytoplasm |
D | 0005829 | cellular_component | cytosol |
D | 0008360 | biological_process | regulation of cell shape |
D | 0008716 | molecular_function | D-alanine-D-alanine ligase activity |
D | 0009252 | biological_process | peptidoglycan biosynthetic process |
D | 0016874 | molecular_function | ligase activity |
D | 0046872 | molecular_function | metal ion binding |
D | 0071555 | biological_process | cell wall organization |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue NA A 401 |
Chain | Residue |
A | GLU68 |
A | SER91 |
A | THR94 |
A | MET95 |
A | THR273 |
A | HOH551 |
site_id | AC2 |
Number of Residues | 2 |
Details | binding site for residue GOL A 402 |
Chain | Residue |
A | TYR223 |
A | HOH512 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue GOL A 403 |
Chain | Residue |
A | PRO82 |
A | TYR83 |
A | GLY85 |
A | GLY87 |
A | ASP306 |
A | GLU77 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue NA A 404 |
Chain | Residue |
A | HIS265 |
C | HIS280 |
site_id | AC5 |
Number of Residues | 13 |
Details | binding site for residue ADP B 401 |
Chain | Residue |
B | LYS97 |
B | SER112 |
B | LYS144 |
B | SER151 |
B | MET154 |
B | GLU180 |
B | LYS181 |
B | TRP182 |
B | LEU183 |
B | GLU187 |
B | TYR210 |
B | MET259 |
B | GLU270 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue NA B 402 |
Chain | Residue |
B | GLU68 |
B | SER91 |
B | THR94 |
B | MET95 |
B | THR273 |
B | HOH546 |
site_id | AC7 |
Number of Residues | 4 |
Details | binding site for residue ACT B 403 |
Chain | Residue |
B | GLY11 |
B | THR12 |
B | THR42 |
B | GLY66 |
site_id | AC8 |
Number of Residues | 5 |
Details | binding site for residue ACT B 404 |
Chain | Residue |
B | TYR83 |
B | GLY85 |
B | GLY87 |
B | HOH512 |
B | HOH526 |
site_id | AC9 |
Number of Residues | 15 |
Details | binding site for residue ADP C 401 |
Chain | Residue |
C | LYS97 |
C | ILE142 |
C | LYS144 |
C | GLU148 |
C | SER151 |
C | GLU180 |
C | LYS181 |
C | LEU183 |
C | GLU187 |
C | PHE209 |
C | TYR210 |
C | LYS215 |
C | MET259 |
C | GLU270 |
C | HOH586 |
site_id | AD1 |
Number of Residues | 6 |
Details | binding site for residue NA C 402 |
Chain | Residue |
C | GLU68 |
C | SER91 |
C | THR94 |
C | MET95 |
C | THR273 |
C | HOH591 |
site_id | AD2 |
Number of Residues | 6 |
Details | binding site for residue ACT C 403 |
Chain | Residue |
C | GLY276 |
C | SER281 |
C | LEU282 |
C | HOH501 |
C | HOH508 |
C | HOH515 |
site_id | AD3 |
Number of Residues | 4 |
Details | binding site for residue ACT C 404 |
Chain | Residue |
C | GLN80 |
C | ASP306 |
C | HOH541 |
C | HOH575 |
site_id | AD4 |
Number of Residues | 5 |
Details | binding site for residue GOL C 405 |
Chain | Residue |
C | PRO82 |
C | TYR83 |
C | GLY85 |
C | ASP306 |
C | HOH549 |
site_id | AD5 |
Number of Residues | 15 |
Details | binding site for residue ADP D 401 |
Chain | Residue |
D | LYS97 |
D | ILE142 |
D | LYS144 |
D | SER151 |
D | MET154 |
D | GLU180 |
D | LYS181 |
D | TRP182 |
D | LEU183 |
D | GLU187 |
D | PHE209 |
D | TYR210 |
D | MET259 |
D | GLU270 |
D | HOH538 |
site_id | AD6 |
Number of Residues | 6 |
Details | binding site for residue NA D 402 |
Chain | Residue |
D | THR273 |
D | HOH546 |
D | GLU68 |
D | SER91 |
D | THR94 |
D | MET95 |
site_id | AD7 |
Number of Residues | 7 |
Details | binding site for residue GOL D 403 |
Chain | Residue |
D | LEU76 |
D | GLU77 |
D | LEU81 |
D | PRO82 |
D | TYR83 |
D | ASP306 |
D | HOH519 |
site_id | AD8 |
Number of Residues | 8 |
Details | binding site for residue GOL D 404 |
Chain | Residue |
D | PRO82 |
D | TYR83 |
D | GLY85 |
D | SER86 |
D | GLY87 |
D | SER251 |
D | ASP306 |
D | HOH503 |
Functional Information from PROSITE/UniProt
site_id | PS00843 |
Number of Residues | 12 |
Details | DALA_DALA_LIGASE_1 D-alanine--D-alanine ligase signature 1. HGrgGEDGtLQG |
Chain | Residue | Details |
A | HIS63-GLY74 | |
site_id | PS00844 |
Number of Residues | 29 |
Details | DALA_DALA_LIGASE_2 D-alanine--D-alanine ligase signature 2. LdcsGwGRVDVMqdrdghfy....LlEVNTsPG |
Chain | Residue | Details |
A | LEU248-GLY276 | |
Functional Information from SwissProt/UniProt
Chain | Residue | Details |
A | VAL134 | |
C | ASP257 | |
C | GLU270 | |
C | ASN272 | |
D | VAL134 | |
D | ASP257 | |
D | GLU270 | |
D | ASN272 | |
A | ASP257 | |
A | GLU270 | |
A | ASN272 | |
B | VAL134 | |
B | ASP257 | |
B | GLU270 | |
B | ASN272 | |
C | VAL134 | |