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Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

5BP2

Dehydratase domain (DH) of a mycocerosic acid synthase-like (MAS-like) PKS, crystal form 1

Functional Information from PDB Data

site_id	AC1
Number of Residues	3
Details	binding site for residue MG A 1201

Chain	Residue
A	THR925
A	GLU926
A	ASP978

site_id	AC2
Number of Residues	3
Details	binding site for residue EDO A 1202

Chain	Residue
A	LYS1146
A	ASP1148
A	GLY1151

site_id	AC3
Number of Residues	5
Details	binding site for residue EDO A 1203

Chain	Residue
A	HOH1407
A	HOH1440
A	LEU1141
A	ARG1143
A	ASP1155

site_id	AC4
Number of Residues	2
Details	binding site for residue EDO A 1204

Chain	Residue
A	ASP933
A	ALA1058

site_id	AC5
Number of Residues	4
Details	binding site for residue EDO A 1205

Chain	Residue
A	PHE970
A	HIS971
A	GLN1008
A	THR1011

site_id	AC6
Number of Residues	4
Details	binding site for residue EDO A 1206

Chain	Residue
A	HIS966
A	ASP967
A	VAL1013
A	ARG1015

site_id	AC7
Number of Residues	5
Details	binding site for residue EDO A 1207

Chain	Residue
A	GLU995
A	PHE996
A	THR1011
A	ALA1012
A	VAL1013

site_id	AC8
Number of Residues	6
Details	binding site for residue EDO A 1208

Chain	Residue
A	LEU975
A	ASP977
A	ALA979
A	THR980
A	HIS1001
A	HOH1311

site_id	AC9
Number of Residues	4
Details	binding site for residue EDO A 1209

Chain	Residue
A	THR1069
A	GLU1072
A	HOH1366
C	GLN938

site_id	AD1
Number of Residues	6
Details	binding site for residue EDO A 1210

Chain	Residue
A	GLN1113
A	ALA1116
A	SER1117
A	EDO1213
C	ALA1025
C	HOH1358

site_id	AD2
Number of Residues	4
Details	binding site for residue EDO A 1211

Chain	Residue
A	SER899
A	HIS901
A	HOH1321
A	HOH1423

site_id	AD3
Number of Residues	5
Details	binding site for residue EDO A 1212

Chain	Residue
A	HIS934
A	HIS1055
A	ASP1100
A	PHE1103
A	LEU1121

site_id	AD4
Number of Residues	8
Details	binding site for residue EDO A 1213

Chain	Residue
A	LEU1044
A	GLY1047
A	PHE1048
A	ILE1107
A	GLN1113
A	EDO1210
A	HOH1391
A	HOH1452

site_id	AD5
Number of Residues	10
Details	binding site for residue GOL A 1214

Chain	Residue
A	HIS934
A	VAL941
A	LEU942
A	PRO943
A	GLY944
A	PHE970
A	PRO1122
A	HOH1325
A	HOH1350
A	HOH1417

site_id	AD6
Number of Residues	5
Details	binding site for residue CL A 1215

Chain	Residue
A	VAL900
A	HIS901
A	GLY905
A	HOH1339
A	HOH1430

site_id	AD7
Number of Residues	3
Details	binding site for residue EDO B 1201

Chain	Residue
B	PHE970
B	HIS971
B	LEU1123

site_id	AD8
Number of Residues	6
Details	binding site for residue EDO B 1202

Chain	Residue
B	PHE1103
B	ILE1107
B	LEU1120
B	LEU1121
B	HOH1305
B	HOH1347

site_id	AD9
Number of Residues	7
Details	binding site for residue GOL B 1203

Chain	Residue
B	HIS934
B	LEU942
B	PRO943
B	GLY944
B	LEU1121
B	PRO1122
B	HOH1305

site_id	AE1
Number of Residues	4
Details	binding site for residue EDO C 1201

Chain	Residue
C	HIS966
C	ASP967
C	ARG1126
C	ARG1127

site_id	AE2
Number of Residues	5
Details	binding site for residue EDO C 1202

Chain	Residue
C	ALA1058
C	PRO1082
C	PRO1084
C	LEU1085
C	PG41212

site_id	AE3
Number of Residues	7
Details	binding site for residue EDO C 1203

Chain	Residue
C	GLY1061
C	SER1063
C	ALA1078
C	VAL1079
C	ALA1080
C	EDO1206
C	HOH1367

site_id	AE4
Number of Residues	2
Details	binding site for residue EDO C 1204

Chain	Residue
C	GLN912
C	GLU916

site_id	AE5
Number of Residues	6
Details	binding site for residue EDO C 1205

Chain	Residue
C	ASP933
C	ARG935
C	GLY1054
C	HIS1055
C	GLY1056
C	HOH1435

site_id	AE6
Number of Residues	4
Details	binding site for residue EDO C 1206

Chain	Residue
C	VAL1079
C	ARG1138
C	TYR1139
C	EDO1203

site_id	AE7
Number of Residues	7
Details	binding site for residue EDO C 1207

Chain	Residue
C	PRO914
C	VAL988
C	THR989
C	ALA990
C	PRO991
C	EDO1208
C	HOH1301

site_id	AE8
Number of Residues	4
Details	binding site for residue EDO C 1208

Chain	Residue
C	PRO914
C	GLU915
C	EDO1207
C	HOH1301

site_id	AE9
Number of Residues	7
Details	binding site for residue EDO C 1209

Chain	Residue
C	PHE1103
C	ILE1107
C	LEU1120
C	LEU1121
C	PRO1122
C	HOH1318
C	HOH1366

site_id	AF1
Number of Residues	9
Details	binding site for residue GOL C 1210

Chain	Residue
C	HIS934
C	VAL941
C	LEU942
C	PRO943
C	GLY944
C	PHE970
C	PRO1122
C	HOH1341
C	HOH1424

site_id	AF2
Number of Residues	1
Details	binding site for residue CL C 1211

Chain	Residue
C	HIS966

site_id	AF3
Number of Residues	7
Details	binding site for residue PG4 C 1212

Chain	Residue
C	GLY1083
C	PRO1084
C	EDO1202
D	THR989
D	ALA990
D	PRO991
D	EDO1208

site_id	AF4
Number of Residues	6
Details	binding site for residue MG D 1201

Chain	Residue
C	HOH1457
D	ASP972
D	HOH1331
D	HOH1350
D	HOH1372
D	HOH1454

site_id	AF5
Number of Residues	4
Details	binding site for residue EDO D 1202

Chain	Residue
D	LYS969
D	HIS971
D	ARG1009
D	THR1011

site_id	AF6
Number of Residues	5
Details	binding site for residue EDO D 1203

Chain	Residue
D	TRP983
D	SER985
D	GLY997
D	VAL998
D	GLU999

site_id	AF7
Number of Residues	2
Details	binding site for residue EDO D 1204

Chain	Residue
D	VAL1039
D	HOH1338

site_id	AF8
Number of Residues	5
Details	binding site for residue EDO D 1205

Chain	Residue
D	LEU1141
D	ARG1143
D	ASP1155
D	GLU1157
D	HOH1451

site_id	AF9
Number of Residues	4
Details	binding site for residue EDO D 1206

Chain	Residue
D	ASP967
D	LYS969
D	THR1011
D	ALA1012

site_id	AG1
Number of Residues	5
Details	binding site for residue EDO D 1207

Chain	Residue
D	LEU1032
D	ALA1033
D	HIS1035
D	PRO1036
D	TYR1066

site_id	AG2
Number of Residues	6
Details	binding site for residue EDO D 1208

Chain	Residue
C	PG41212
D	PRO914
D	VAL988
D	THR989
D	ALA990
D	PRO991

site_id	AG3
Number of Residues	8
Details	binding site for residue EDO D 1209

Chain	Residue
D	PHE970
D	HIS971
D	MET973
D	LEU1123
D	GLY1177
D	GOL1212
D	HOH1366
D	HOH1432

site_id	AG4
Number of Residues	5
Details	binding site for residue EDO D 1210

Chain	Residue
D	ILE1107
D	LEU1120
D	LEU1121
D	PRO1122
D	HOH1314

site_id	AG5
Number of Residues	4
Details	binding site for residue GOL D 1211

Chain	Residue
D	HIS966
D	ASP967
D	ARG1126
D	ARG1127

site_id	AG6
Number of Residues	8
Details	binding site for residue GOL D 1212

Chain	Residue
D	HIS934
D	LEU942
D	PRO943
D	GLY944
D	LEU1121
D	PRO1122
D	EDO1209
D	HOH1314

site_id	AG7
Number of Residues	2
Details	binding site for residue CL D 1213

Chain	Residue
D	HIS966
D	ARG1015

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	1120
Details	Region: {"description":"Dehydratase (DH)","evidences":[{"source":"PubMed","id":"26976449","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	496
Details	Region: {"description":"N-terminal hotdog fold","evidences":[{"source":"PROSITE-ProRule","id":"PRU01363","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	4
Details	Active site: {"description":"Proton acceptor; for dehydratase activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01363","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	4
Details	Active site: {"description":"Proton donor; for dehydratase activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01363","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

244349

PDB entries from 2025-11-05

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