5B4P
Complex structure of human C5a and its binding repebody
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| B | 0005576 | cellular_component | extracellular region |
| B | 0006954 | biological_process | inflammatory response |
| B | 0006956 | biological_process | complement activation |
| D | 0005576 | cellular_component | extracellular region |
| D | 0006954 | biological_process | inflammatory response |
| D | 0006956 | biological_process | complement activation |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue 1PE A 301 |
| Chain | Residue |
| A | ILE136 |
| A | GLU160 |
| C | LYS27 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 A 302 |
| Chain | Residue |
| A | ASP77 |
| A | SER79 |
| A | ALA80 |
| C | ASP77 |
| C | SER79 |
| site_id | AC3 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 A 303 |
| Chain | Residue |
| A | GLY126 |
| A | ASP125 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 A 304 |
| Chain | Residue |
| A | LYS111 |
| A | HOH403 |
| A | HOH404 |
| site_id | AC5 |
| Number of Residues | 7 |
| Details | binding site for residue 1PE B 101 |
| Chain | Residue |
| A | TYR67 |
| A | TYR89 |
| A | GLU112 |
| B | LYS14 |
| B | HIS15 |
| B | SER16 |
| D | SER16 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 B 102 |
| Chain | Residue |
| B | GLU8 |
| C | GLU20 |
| C | LYS23 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 C 301 |
| Chain | Residue |
| C | LEU161 |
| C | ASP162 |
| C | TRP210 |
| site_id | AC8 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 C 302 |
| Chain | Residue |
| C | ARG66 |
| C | HOH419 |
| site_id | AC9 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 C 303 |
| Chain | Residue |
| C | TYR114 |
| C | ILE136 |
| site_id | AD1 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 D 101 |
| Chain | Residue |
| D | ARG40 |
| D | ARG40 |
| site_id | AD2 |
| Number of Residues | 9 |
| Details | binding site for Di-peptide ARG C 253 and ILE C 255 |
| Chain | Residue |
| A | ARG253 |
| C | SER227 |
| C | ASN231 |
| C | LYS250 |
| C | PRO251 |
| C | VAL252 |
| C | SER254 |
| C | ILE256 |
| C | CYS257 |
Functional Information from PROSITE/UniProt
| site_id | PS01177 |
| Number of Residues | 35 |
| Details | ANAPHYLATOXIN_1 Anaphylatoxin domain signature. CCydGacvnnde.TCEqraarisl.GprCikafte.CC |
| Chain | Residue | Details |
| B | CYS21-CYS55 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 68 |
| Details | Domain: {"description":"Anaphylatoxin-like","evidences":[{"source":"PROSITE-ProRule","id":"PRU00022","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 58 |
| Details | Region: {"description":"Involved in C5AR1 binding","evidences":[{"source":"PubMed","id":"9553099","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"16335952","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"18536718","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"3CU7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3KLS","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"3KM9","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
